Phoenix dactylifera (date palm): 103720372
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Entry
103720372 CDS
T03274
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103720372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pda03000
]
103720372
Transcription factors [BR:
pda03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
103720372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103720372
NCBI-ProteinID:
XP_008808259
UniProt:
A0A8B8JBN5
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All DBs
Position
2:complement(16233472..16244359)
Genome browser
AA seq
722 aa
AA seq
DB search
MEAISSGEDLILKRRKPYTITKRRERWTEEEHNRFLEALKLYGRAWQRIEEHVGTKTAVQ
IRSHAQKFFSKLEKEALTEGIPLGHSHDIEIPPPRPKRKPIFPYPRKVDVGSPSPFEEAK
DEKVSNSAASQEKPVAVEMQQRTKRTSGGGSCSEVFNLLQDVPSASMSLANKGSSNICTF
QHYVKEVKDKTAQSETSKTVKDNHEEKKKVADPTDMDVGRLGRTCLHSQPKFAHKERRDA
RKQTEKFGPSLEDNQQGAHCYSKHIPGQFIDRNSAKCKQTACSNEFIMPVTNQVEAHADV
NPFKNPITSAGHESCSNRTVSSAHQPVPVFPPPFTQFGSNQDAYRSFLSSASSSLILSAL
LQNPSTHAGASLAASFWQAVNANAPVDLTAENLNGGMSEKQSNPSPSMAALAAATVAAAS
AWWATSGLLPMFPPFQPSYAFAPSSTVPVPTVYIAQAPEDNKEKKDGRPQNLSQEDHQKI
MDPGHSGALRTTQKASKLLPSSESDLDESGRGERSPYAKLKFSAADKFEPVSDTGFLDSD
KAQHNKNSNRSSYGSNTLSSSEVETETMIKKHKEVNDEAERVHLENHLFGEASNHRLHSS
RVTNGSWKEDLGEDGPAFQAHSTRELMPQRFSPLQTNGDEMPNLCKDKEVTALPADLSGK
ACESTNKLNIDSEDSLVSEIEHGKLKATRRAFKPYRRCTVEAKDNQAATDEERSGKRIRM
EG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatctcgtctggggaggatttgattctaaagaggaggaagccttataccatc
acaaagcgaagggagaggtggacagaggaggagcataacaggtttttggaagctctgaaa
ctttacgggagggcgtggcagcgtatagaggagcatgttggtacaaaaacagctgtacag
atcaggagtcatgcacaaaagttcttctcaaagttggaaaaagaagccctcacagaaggc
attcctctagggcactctcatgacatagaaatcccacctccacggcctaaaagaaaacca
atattcccatatcctcggaaagttgatgttggttctccttctccatttgaggaagcaaag
gatgaaaaagtgtcaaattctgctgcttctcaagagaagcctgttgcggtagaaatgcaa
caaagaacaaaacggacatctggaggtggcagctgctcagaagtctttaaccttctccaa
gatgttccatctgcttccatgtctttggcgaacaagggctcttcaaacatttgtaccttt
cagcattatgtgaaagaagtcaaagataagactgcacagagtgaaacctcaaagactgtt
aaagataatcatgaggagaagaaaaaagtagcagatcccacagacatggatgtaggtaga
ctcggcagaacttgcttgcattcacaaccaaaatttgcccataaagagaggagagatgca
agaaagcagactgaaaaatttggcccatcattggaagataatcagcaaggtgctcactgc
tactcaaagcatattccagggcaattcatagacaggaacagtgcaaagtgcaagcagact
gcatgttctaatgaatttatcatgccagtgactaatcaagttgaagctcatgccgatgtt
aatccattcaagaatcctattacttcagcaggacatgaaagctgcagcaaccgtacagtg
tcttctgctcatcaaccagttccagtgttcccaccaccctttacccaatttggcagcaat
caagatgcttacagatcattcctgtcatctgcttcttcaagtctcatattgtctgccttg
ttgcaaaatccatcaactcatgcaggagcaagccttgctgcttcgttctggcaagcagtt
aatgccaatgcccctgttgacttaactgcagaaaaccttaatggaggcatgtctgaaaaa
caatcaaacccatccccaagtatggcagcccttgctgctgccacagttgcagcggcatct
gcatggtgggcaaccagtggattgttgccaatgtttcctccctttcaaccaagttacgca
tttgcaccgtcatccacagtaccagttcccacagtgtacatagctcaagctccagaagac
aataaagaaaagaaagatggcagacctcaaaatctttcgcaggaagatcaccagaaaatc
atggatccaggacactctggggctctgagaaccacacagaaggcttctaaattgttacca
tcttcagaatcagatttagatgaaagtggaagaggtgaaaggtctccgtatgccaagcta
aaattttctgcagctgacaagtttgaaccagtatcagatactggatttctagactctgac
aaagcacaacataataagaattcgaatcgctcttcttatggttccaacacactttccagc
agcgaggtagaaactgaaaccatgataaagaagcacaaagaagtcaatgatgaagctgaa
cgagtccatttagaaaatcatctgtttggtgaggctagcaatcatcgacttcatagtagc
agagtcaccaatgggtcatggaaggaggaccttggagaggatggacctgccttccaagca
cactctactagagaactgatgccacaaagattttcaccactgcagactaacggtgatgaa
atgccaaatttatgtaaggacaaggaagttactgcgttgccagctgatctcagcgggaag
gcatgcgaatcaactaataaacttaacattgacagtgaagatagtttggtgagtgaaatt
gaacatgggaagctgaaagcaactcgaagagcatttaaaccttacaggagatgtacggtg
gaagccaaggacaaccaggcagctactgatgaagagagaagtggcaagagaatacgtatg
gaagggtaa
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