KEGG   Phoenix dactylifera (date palm): 103720445
Entry
103720445         CDS       T03274                                 
Name
(RefSeq) uncharacterized protein LOC103720445 isoform X2
  KO
K03873  elongin-B
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103720445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pda04121]
    103720445
   03400 DNA repair and recombination proteins [BR:pda03400]
    103720445
Ubiquitin system [BR:pda04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     103720445
   Cul5 complex
     103720445
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103720445
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N Ubiquitin_5 DUF1349 Ubiquitin_2 TnpW
Other DBs
NCBI-GeneID: 103720445
NCBI-ProteinID: XP_008808362
UniProt: A0A8B7CXN9
LinkDB
Position
7:complement(10878588..10892507)
AA seq 115 aa
MAMYIRVKRNKTTYFVQCDPTETTLNIKQKLQNLIDQPSNNQRLSLVATNDILDDSKTLA
EQKVENDAVVALALRKAYWMEGQHLSKNENMLVNTVFSCAAPDNSEGTSRDSNLL
NT seq 348 nt   +upstreamnt  +downstreamnt
atggctatgtatattcgtgtaaagcgcaacaagacaacctactttgtgcagtgtgatcca
accgagacaactctaaacattaagcagaaattgcaaaatttgattgatcaaccaagcaat
aatcagcgtttaagcttggtagcaactaatgatatattagatgattcaaagacattagct
gaacagaaggtggagaatgatgctgttgtggcattggctctcagaaaagcatattggatg
gaaggacaacacttaagcaaaaatgagaacatgttagtgaatacagttttttcttgtgcc
gctccagacaactctgaaggtacatcaagagacagcaacctcctctaa

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