Phoenix dactylifera (date palm): 103720578
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Entry
103720578 CDS
T03274
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X6
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103720578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103720578
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
103720578
SWR1 complex
103720578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
HDA2-3
DBINO
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
103720578
NCBI-ProteinID:
XP_026665609
UniProt:
A0A8B8JBN2
LinkDB
All DBs
Position
4:2085802..2113864
Genome browser
AA seq
2074 aa
AA seq
DB search
MASKGPRSKLDHESRARRQKALEAPREPPRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVAIRASKSVLDHATRGEKKVKEEEQRLRKVALNISKDVKKFWLKIEKLVLYKYQLELE
ERKKKALDKQLDFLLGQTERYSTMLAENLVDMPYSSKTVHVDSGVEQPCDSKREGDKSSL
TKTTTDPETQLFNVETDDEYGIQSDDELEDDECTIDVDEAQITEAERKEELAGLQAEADI
PLEELIKRYTMNKFSREVSPESDENLAEPLMKRYQIKDSWNQVNGSNHAVGISSDVAHLL
ADNEGPHFISKMIENSHPGHGSSQHHHGDHNGDSSCLEGQSTVKKSQPKLYSEPLNQLDM
DCSPTGSGDELDDRDYIVIAEEEKDDETTLSEEEELAKKEATDPLNEIKLLQQESELPIE
ELLSRYKKDDFTDDGTMESECAFSSSDDQVDCAMHQDVQHGSQNPTLDDGMFHEHNPAEP
RETDSANKEAEVNHDRIMDGRESENIIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKHP
LREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTS
VMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHICITTYRLVIQDSKVFKR
KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIF
QSHQEFKDWFSNPISGMVDGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPKKHEHVI
YCRLSRRQRNLYEDFIDSSETQATLASANFFGMISVIMQLRKVCNHPDLFEGRPIISSFD
MAGIDMQLSSSVCTILSSGPFSEVDLRDLNFVFTQHEYNTTSWEVDEVAAIASSPTLTKG
TGLQALDGASFCNSRYEKKRRVHGTNIFEEIQMALWEERAKQLKEREASIAWWNSLQCRK
KPIYGTNLRALVTIKHPVHGIHEQKNKPSCYMNFSSRLADIVLSPVERFQKMLDVVESFM
FAIPATRAPAPVCWFSRGRSPVFLEPTHKEKCIQLFSPLLTPIRPAIVRRQVYFPDRRLI
QFDCGKLQELAMLLRRLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEER
QTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQT
REVHIYRLISESTIEENILRKANQKRALDDLVIQSGSYNTEFFKKLDPMELFSGHGALHI
ENLHKGNSSAVECSTDEMGVHLSNADVEAAIKLAEDEADYMALKKVEEEEAVDNQEFTEE
VIGRLDDEDLVNEDDMKHDEKIAEELSCWTSVGNRDDDNTLCASNVNDEKALTLAGGDED
IDMLADVKQLAAAAAAAGQASSSFENQLRPIDRYAMRFLDLWDPIIDKSAIEYQVNIEEK
EWELDRIEKFKEDLEAEIDEDQEPFLYERWDADFATTAYRQHVEALTQRQLMEELECEAQ
DKRDADDENCDAIRNVAAVERKPKSKKKLKKTKFKSLKKGPLASESEIVHEPPVDPMPAD
YKVLSPEIICPESPSHSPPIKKRKKAIAASEEKSSRKCLKKMKKAPEKNSAADSNSAVKK
LVETRDIKSGEGANDLDLKTANRIKTGGRISITYMPVKRVMVVKPERLRKRGHVWSKDCF
PPPDSWSSQEDAILCATVHEFGAHWSLVSDTLYGIPGGGFFRGRFRHPAHCCERFRELFF
KYVMSAVDTSNTEKINPSGSGKALLKVTEDQVHALVNVTSELPDNELLLQKHFIAILSSV
WRAKCRIERCQNMPSSSRLAIDSSGKNSRRPTEKMKLANLRQSSKLVMTAITDSYREHQE
EPVVLSGQPEACSIVDQLDLTLNFAMDQVNHDTAFPSSITVSIRGPEPRQEDNVPPERFL
LAESSCRTAENRFRLALGACFEGEGLGWALPAFPPADIIRYKSGSKSQSLGKHKVASDST
KPPKSKVQRTTEPHEDSGLIGKSLLPSSRQTPPLESYSLPHLILDSGSDYSWLPAMDALP
RETEGFELVPHEYDPNFLGDLEDPGSLLDIIDIG
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaagggtcctagatcaaagctagaccatgagtcaagagctaggcgtcaaaag
gctctagaagccccaagggagcctcctcgaccaaaaactcattgggatcatgttttggag
gagatggtttggctgtcaaaggattttgaatcagagagaaagtggaagttggctcaggcc
aaaaaggtggcgataagagctagtaagagtgttctggatcatgccactaggggggagaaa
aaagtgaaggaagaagagcagcgcttgagaaaagtcgcccttaatatatcgaaggatgta
aagaaattttggttgaaaatcgagaagctggttctttataagtatcaattggagctcgag
gaaagaaagaaaaaggctcttgataaacagcttgattttcttttgggtcaaactgaaaga
tattctacaatgctagcagaaaaccttgtcgatatgccatattcttctaaaacagtgcat
gtagattctggagtggaacaaccatgtgattcaaagagagagggggataaaagtagcctt
acaaaaactacaactgatcctgagacacagttatttaatgtggaaactgatgatgagtat
ggaatccaatccgatgatgagttggaagatgatgaatgtaccatcgatgtggatgaagct
caaattacagaggcagaacggaaggaagaactggctggcttgcaagctgaagctgatata
ccactcgaggaacttatcaagcggtacacaatgaacaaatttagcagggaagtcagtcca
gaaagtgatgaaaatttggccgaaccacttatgaagagatatcagattaaggattcttgg
aaccaagtaaatggctctaatcatgctgttgggatttcatcagatgttgctcatcttctt
gcagacaatgaagggcctcattttataagcaagatgattgaaaacagccacccaggccat
ggctccagtcagcaccatcatggtgatcacaatggcgattcttcttgcctggaaggccaa
tcaaccgttaagaaatcacaaccaaaactttactctgagcctctcaaccagttagatatg
gattgttcacctactggttctggtgatgaactggatgacagagattatattgtcattgct
gaggaagaaaaggatgatgaaacaacattgtcagaagaggaggagttggcaaagaaagaa
gcaactgaccctctgaatgagatcaagttactgcaacaagagagtgaattgcctattgaa
gagctgctttcaaggtacaaaaaggatgactttactgatgatggcaccatggaatctgaa
tgtgccttctcaagttctgacgatcaggtagattgtgcaatgcatcaggatgttcaacat
ggcagtcaaaaccccaccttggatgatggtatgtttcacgagcacaatcctgctgaaccc
agggaaacagactctgctaataaagaagctgaggtgaatcatgatcggataatggatggg
agagagagcgagaatataattgctgatgcagctgctgctgcaagatcagcacaaccaact
ggtaacactttctcaacaacaaaagtgcgtacaaagttcccattccttcttaagcaccct
cttcgtgaataccaacatattggcctagattggctggtcacaatgtatgagaagaggctc
aatggaattttagcagatgaaatgggtttagggaagacaatcatgacaattgctcttctt
gcacatctagcatgtgaaaagggcatatggggacctcatctcatagtggtgccaactagt
gttatgctgaattgggaaactgaatttcttaaatggtgccctgctttcaaaatactgaca
tacttcggaagtgcaaaagaacggaagcataagagacagggttggctaaagcccaactcc
ttccatatatgcatcaccacctacaggcttgttatacaggattcaaaggtattcaaaagg
aagaaatggaaatatttaattctggatgaagctcacttgataaagaactggaaatctcag
aggtggcagactctattaaattttaattcaaagcgccggattttattgactggaacacct
ctacagaatgacctcatggaactttggtctctaatgcattttttaatgcctcacattttt
cagtctcatcaggaatttaaagactggttcagcaatccaatttctggtatggtagatggt
caagaaaaggttaataaagaagttgtggatcggttgcacaatgtgcttcgtcctttcata
ctgcgacgtttaaagagggacgttgaaaagcaactcccaaagaagcatgaacatgtcata
tattgtcgactttctagaagacaacggaatttgtatgaggatttcattgacagctcggaa
acgcaagcgacattggcaagtgcaaatttttttggcatgattagtgttataatgcaactc
cgtaaggtttgcaatcatcctgatctttttgaaggccgtccaatcataagttcatttgac
atggctggtatagacatgcagctaagctcttctgtttgcacaatcctttcttctggtcca
ttttctgaggttgatctgagagacttgaattttgtattcacccagcatgaatataatacg
acctcatgggaggttgatgaagttgcagcaattgcttcttctccaactttaaccaagggc
actggactgcaggctttggatggagcgtcattctgtaatagtagatatgagaaaaagaga
agagttcatggaactaatatatttgaagagattcagatggccctttgggaggaaagagcg
aaacagttaaaagaaagggaagcctctattgcatggtggaattctttgcagtgccgtaag
aaacctatctatggaactaatctaagggcgcttgtcactataaaacatcccgttcatggt
attcatgagcagaagaacaagccttcatgctacatgaacttttcatctagactggcagat
atagttctgtcacctgttgaacgctttcagaagatgcttgatgtggttgaatcttttatg
tttgctatccctgcaacacgagcccctgctcctgtttgctggtttagcagaggacgatcc
cctgtttttttggaaccaactcataaggaaaaatgcattcagcttttttctccactcctt
acacccattagacctgccattgtccgtcggcaagtgtattttcctgataggcgtcttata
caatttgattgtgggaagttacaagagcttgctatgttgctgaggcgcttgaaatcagaa
ggtcatagggccttgatattcactcagatgactaagatgcttgatatcttggaggcattc
attaatttgtatggctatacatatatgcgtttagatggatccacacaaccagaagagcgg
cagactctgatgcagcggtttaatacaaatccaaaatattttctttttattttatccact
cgtagtggtggtgtagggattaacctagttggtgcagacactgttatcttttatgatagt
gattggaatcctgcaatggatcaacaagctcaagatagatgccacaggattggacaaaca
cgagaagtgcacatttatcgacttattagtgagagcaccattgaggagaacatcttaagg
aaagcaaatcagaagcgcgctcttgatgatttagtcattcagagtggcagttacaataca
gagttctttaaaaagcttgatcctatggaactattttctggtcatggagcacttcatatt
gaaaatctgcataaggggaactccagtgctgttgaatgttccaccgatgaaatgggggtg
catttgtcaaatgcggatgtcgaagcagctatcaaacttgcagaagatgaagcagattac
atggccctcaaaaaagtggaggaggaagaggctgtagataatcaagaattcactgaagag
gttattggaaggctagatgatgaagatcttgttaatgaagatgatatgaagcatgatgag
aaaattgctgaagaactgagctgctggacttctgttggaaacagggatgatgacaatact
ttgtgtgcgagtaatgttaatgatgaaaaggctcttactttggctgggggagatgaagat
attgacatgcttgctgatgttaagcagttggctgctgcagctgctgctgctggacaagca
agttcatctttcgaaaatcaacttcgaccaattgatagatatgctatgcgttttctggat
ctttgggatccaataattgacaagtcagcaatagaatatcaggtgaacattgaagagaaa
gaatgggagctcgatcgtattgaaaaattcaaagaggatctagaagctgagattgatgaa
gatcaggagcccttcttatatgaaagatgggatgctgattttgcaactacagcataccgg
caacatgttgaagctttaactcagcgccagttgatggaagaactagaatgtgaagctcag
gataaaagggatgcagatgatgagaattgcgatgccatcaggaatgtggcagcagttgaa
cgtaagcctaagtcgaaaaagaagttgaagaagacaaagttcaagtcgctgaagaaggga
cctctagcgtctgaatcagaaatcgtgcatgaaccaccagtagatcccatgcctgctgat
tataaggttctttctccagagatcatctgtcctgagtcaccatcacattcacctcctata
aaaaagcgtaagaaggccatagctgcatcagaagaaaagagctcaagaaaatgcttgaaa
aaaatgaagaaagctcctgagaaaaattctgcagcagattctaactctgcagttaagaaa
cttgtggaaaccagagacatcaaatctggagagggagctaacgatcttgatctcaaaaca
gcaaacagaattaagacaggaggcaggatttcaatcacatacatgccagtaaaacgtgtt
atggtggtcaagccagaaaggttaagaaagaggggacatgtttggtcaaaagattgcttt
ccccctccagattcttggtcatcccaggaggatgccatattatgtgcaactgtacatgaa
tttggtgcgcattggagtcttgtgagtgacacactttatggtattcctggtggtgggttt
ttcagagggaggtttcgccatcctgcccattgttgtgagaggtttcgagaattattcttt
aaatatgttatgtctgcagtggacacttctaacactgaaaagattaacccttccggatct
ggaaaggctctcctaaaagtgaccgaggatcaagttcatgcattggtcaatgtgacaagt
gagctgcctgataatgaattgcttcttcagaaacattttattgcaatactttcttctgta
tggagagcaaaatgtcgtattgagcgctgtcaaaacatgccatcttcgagcaggcttgcc
atcgactcgtctgggaagaattcgagaagaccaactgaaaagatgaagctggcaaatttg
agacagagcagcaagctagtgatgacagccattactgattcttatagggaacatcaagaa
gaaccggtagttctgtccggtcagccagaggcttgttctatagttgatcagttggatcta
acattgaatttcgccatggaccaagttaatcatgacactgcttttccatcatcaattact
gtgtcaatacgtggcccagaacctcgacaagaagacaatgtacctcctgaacgatttttg
ctagcagaatcttcttgcagaactgctgagaaccgcttcaggctggctttaggagcttgc
ttcgaaggtgaaggtttgggatgggcattaccagcttttcctccagcggatattatcaga
tacaaatctggttcaaagtctcagtctttaggcaagcataaagttgcatctgattcaacc
aagcctccaaaatcgaaagttcagaggactacagaaccacatgaagattcaggtttgatt
ggcaaatccctcttgccatcatctaggcaaactcctcccctcgagagctacagcttgcct
cacctcattttggattctgggagtgactattcttggctccctgccatggatgcactgccg
cgagaaaccgaaggctttgaacttgttccgcacgaatatgaccctaactttcttggtgat
cttgaggatcctggatcactgctggatatcatagacatcggatga
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integrated database retrieval system
