Phoenix dactylifera (date palm): 103720692
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Entry
103720692 CDS
T03274
Name
(RefSeq) probable ribosomal RNA small subunit methyltransferase B isoform X2
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103720692
Enzymes [BR:
pda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
103720692
Ribosome biogenesis [BR:
pda03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
103720692
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_31
Ubie_methyltran
Methyltransf_25
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
103720692
NCBI-ProteinID:
XP_008808746
UniProt:
A0A8B7CXV1
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All DBs
Position
1:complement(24226705..24243455)
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AA seq
558 aa
AA seq
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MEGALSFFSPSPFSSNRSNLSLPKKPLSQFSSSRASIPKVSPLPRSSKRTRKSDVRISPK
TAERSRISRPLDSKKINIQKLNAEVSPHRAVSAVRLLRIEQGGAFADLLNEKGRKAAENE
MSYVERTLGFRTRDLDDRDIRLVTDVVGGSVRWRRYLDHLIMSLCNKERMFTDMEPLLLQ
ILRIGFFEILKLGMPPYAVVDENVKLAKAALRPGAGNLVNAVLRKLVSLKEKDSLPLPTL
EGDDHAQARALAVIHSHPVWMVRRWTKFVGQEEAVRLMNWNNSDPCFSLRVNTAKGFKRV
DLVNRLEDLMVPYELSSCMDDFVRIHTGMQIVIQAGLLKDGICSVQDESAGLVVSVVGPQ
PGDAIIDCCAAPGGKTLFMASCLRGKGTVMAIDINRGRLRILKEACKLLNVTNVVITTHA
DLRLYAEKHNVKVDKVLLDAPCSGTGVLSKRADLRWNRQLEDLEQLKHLQDELLDAASML
VKPGGILVYSTCSIDPEENEERVAAFLQRHPEFVVHPVHPYVPPDFITDKGFFFSNPVKH
RMDGSFAARLVRSLDYPC
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagccctctctttcttctccccttctccgttctcttccaatcgctccaacctc
tctcttccaaagaaacctctctcccaattctcctcttcccgagcctcaattcccaaggta
tcgcctctgcccaggtcctcgaagagaacccgtaaatccgatgtccggatttctcccaag
accgcagagaggagtcgaatttctcggcctcttgattccaagaagataaatatccagaag
ctaaatgctgaggtttctcctcacagagcagtttctgcggtgaggctgctgaggattgag
caaggtggcgcttttgcggaccttttgaatgagaaggggaggaaagctgccgagaatgag
atgagttatgtcgagaggacacttgggttccgcacacgggatttggacgacagagatatt
agactggtgacagatgttgttggaggaagtgttcgttggagacgctacctcgatcatctt
atcatgtctctctgtaacaaggagagaatgtttacagacatggaaccacttctactgcaa
attctccgcattgggttcttcgagatcttgaagctaggcatgccaccatatgctgttgtt
gatgagaatgtaaaacttgcaaaagctgctctaaggcctggtgcagggaatttagtaaat
gcagttttacggaaacttgtctcactgaaggaaaaagattcgcttcccctgccaactcta
gaaggtgatgaccatgcacaagcacgtgctcttgctgttattcattcccatccagtttgg
atggttagaagatggacaaaatttgtggggcaagaagaagctgtgaggctaatgaactgg
aacaacagtgatccctgtttcagcctaagggtgaacactgcaaaaggctttaagagagtt
gatcttgttaaccgactggaagatttgatggttccatatgagctgtcttcatgcatggat
gactttgttcgcatccatactggcatgcagattgtaatacaagctggcttgctaaaagac
ggaatatgttcggttcaggatgagagtgctggtctggtggtgtctgtggtaggcccacaa
ccaggagatgccatcattgattgctgtgcagcacctggtggaaagactcttttcatggcg
tcatgtctgagaggaaaaggtacggtaatggcaattgacataaatagaggtcgcttaagg
attctcaaagaggcatgcaagttacttaatgtcactaatgtggtcattacaacccatgct
gaccttcgattatatgctgaaaagcataatgtaaaggttgataaagtccttttggatgct
ccctgctctggaacaggtgttctttccaagagagcggatttacgttggaatagacaatta
gaagatttagagcagttgaagcatttgcaagacgagcttcttgatgcagcttccatgctg
gtgaagccgggtgggatacttgtgtacagtacttgctccattgatcctgaagaaaatgag
gagcgggttgcagcatttcttcagaggcatcccgaatttgttgtgcatcctgtccatcca
tatgtgcctccagatttcattacggataaaggtttctttttctcaaatccagtcaagcat
aggatggatgggtcatttgcagcgcggctagttcgatccttggactacccatgctaa
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