Phoenix dactylifera (date palm): 103720838
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Entry
103720838 CDS
T03274
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
103720838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103720838
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
103720838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
DUF4172
Motif
Other DBs
NCBI-GeneID:
103720838
NCBI-ProteinID:
XP_008808985
UniProt:
A0A8B7CYQ2
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MATTGNKEGDWDFHLRSLSANARDSSSASDPASDPYLLQSVRKIYDICKEGGSEELVARA
YPQINKLFHRCITALPQSQTSNGLLLLTILQFFLDFGEVVLHDADPSLRTFFRSCLSREF
SDPVVAEATLDFLNLNMKKLLISFPTLLPQFFPLLLKLIAWNGERFEKSFLMILPAMMST
GSFLPLFLSLLDLPILIVALEKVERSSGTLIGSSIASIQKSTAPEMLLALMDEAYTGSAI
EDRGGDSGSDDNNTIDVADPVFLDLLKDENDGLAMRHWTSPSMVSLLQATTNAPQSDRLR
QALYMTPRFLALYFTTALRDVNDSMLCALLPLLMSRFDTMFPDKVFSFEVRKRFSDFMLA
AFQRSPDFIALLKKPITDRLGEAYDSPAKTELALHLCWAIGEHGAGGISHKDVARELFES
LELLLYENLSSSRLGLGQESAVDSNIAAFRKSSQARLLCFVVTAIAKLATCHNELLPRAR
VSLAKVARSRNSDRRVWRRASDYLGLMSEPAICLSVLGSSTRHVNGPGIVNWSEGGSKMI
AHIPFYILNEQEGPPFHDFSFFDVFPRV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaccggcaataaggaaggagactgggacttccacctgagatcactctcggcc
aacgccagggattcctcctccgccagcgatcccgcctcagatccttatctcctccaatcg
gttagaaagatatacgatatttgcaaggagggaggatcggaggagttggtggctcgggca
tatccgcagatcaacaagcttttccaccgatgcatcaccgccttgccgcagtcccagacc
tccaatggccttctactgcttactatccttcaattttttcttgattttggagaagtggtt
ctacatgatgctgatcctagtttaaggacctttttccgttcatgcttaagtagggagttt
tcagaccctgttgttgcggaagcgacccttgactttcttaacttgaacatgaaaaaactt
ctcatttcatttcccactttactcccacagttcttcccattgctgctaaagttaattgct
tggaacggagagagatttgagaaatcttttttgatgattcttccagcgatgatgtcaact
gggtcatttcttcccctttttctatcactcttggatctgccaatactgatagtggcattg
gaaaaggtagaaagaagctcaggaactctcattggcagtagcatagcttctatccagaag
agtacggctcctgagatgctacttgcactcatggatgaagcttatactggatcagccata
gaagatcgggggggtgattctggttccgatgataataatacaatagatgttgctgaccca
gtgtttcttgaccttctaaaagacgagaatgatgggcttgctatgcgccattggacctct
ccttcgatggtttcattattgcaagctactaccaacgcccctcagtctgataggctgaga
caagcactttatatgacacctcggtttcttgctctatattttacaacagcattgagagat
gtcaatgattcaatgttatgtgcattacttccacttcttatgtcgagatttgatacaatg
ttcccggacaaggttttctcttttgaggttcgaaagaggttttcagatttcatgctagct
gcatttcaacgatcacctgattttattgcactgctgaagaaacctatcacagacagactt
ggggaagcatatgacagtcctgccaagacagagttggcattgcatttgtgttgggccatt
ggggagcatggagctggtggcatctctcacaaggatgtggctcgtgagctatttgagagc
ttagaattgcttttatatgagaatctttcatctagtcgtttgggcttgggacaggagtca
gctgttgactcaaatattgctgcttttagaaaatcttcgcaagctagacttctttgcttt
gtggtgacagcaatcgcgaaacttgcaacgtgccacaatgagctacttccaagggctcga
gtgtcattagctaaggtggctcgttctcgaaactcagacaggagggtctggagacgtgct
agtgattatttgggactaatgagtgaaccagcaatctgcttgtctgttttgggatcctca
acaaggcatgtcaatggtcctggcattgtcaattggagtgaaggaggatcgaagatgatt
gctcatattccattttacattcttaacgaacaagaaggtccgccctttcatgacttttcc
ttctttgatgtctttccaagagtatga
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