Phoenix dactylifera (date palm): 103720995
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Entry
103720995 CDS
T03274
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103720995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103720995
03110 Chaperones and folding catalysts [BR:
pda03110
]
103720995
03029 Mitochondrial biogenesis [BR:
pda03029
]
103720995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103720995
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103720995
Messenger RNA biogenesis [BR:
pda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103720995
Chaperones and folding catalysts [BR:
pda03110
]
Heat shock proteins
HSP60 / Chaperonin
103720995
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103720995
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103720995
Exosomal proteins of other body fluids (saliva and urine)
103720995
Exosomal proteins of breast cancer cells
103720995
Exosomal proteins of colorectal cancer cells
103720995
Exosomal proteins of bladder cancer cells
103720995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103720995
NCBI-ProteinID:
XP_008809220
UniProt:
A0A8B7CZ20
LinkDB
All DBs
Position
5:587972..598648
Genome browser
AA seq
612 aa
AA seq
DB search
MASTFSTMSTIGSVAAPSSFVTDRKLSASAQKFSKLSSLASSSSSSLSGRRQNLHLQKRC
NSGIRAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDG
VTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANP
VQITRGIEKTAKSLVAELKLMSKVVEDSELADVAAVSAGNNYEIGNMIADAMSKVGRKGV
VTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLI
NVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAI
LTGATVIRDEVGLSLDKADKEVLGTAAKVVLTKDSTTIVGDGSTQEEVTKRVAQIRNLIE
AAEQEYEKEKLNERIAKLSGGVAVVQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVG
GGCTLLRLAAKVDAIKDTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVIEKVLSS
DNFKFGYNAATGNYEDLMASGIIDPTKVVRCCLEHAASVARTFLTSDVVVVDIKEPEPVP
AGNPMDNSGYGY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaactttcagcaccatgtctacaattggctctgtggctgctcccagcagtttt
gtgactgacaggaagctctcagcttctgctcaaaagttctctaagctctcttctcttgct
tcctcatcttctagttctctaagtggcaggaggcagaacttgcacctgcagaaaagatgt
aactctggtatcagggcaatggccaaggagttgtacttcaacaaggatgggtctgccatt
aagaagctgcaaacaggagttaataagcttgcagaccttgtgggggtcactcttggccca
aagggcaggaatgttgttctggagagcaaatatgggtcgccaaaaattgtcaatgatggt
gtcactgttgccaaagaggttgaactagaagatcctgtggaaaacattggggctaagttg
gtacggcaagctgctgcaaagaccaacgacttggctggggatgggactactacttccgtt
gttcttgctcaaggtttgattgcggaaggtgttaaggtggttgcagcaggtgcaaaccca
gttcagatcacccgaggtattgagaaaacagccaaatctctagttgctgaactcaagcta
atgtcaaaagtggttgaagacagtgaacttgctgatgtagctgcagtcagtgctggaaac
aactatgagattggaaacatgatagctgatgctatgagtaaggtgggtaggaaaggggtg
gttacacttgaagaggggaaaagtgccgagaatagcctttacgttgtagaaggcatgcaa
tttgatcgtggttacatctctccatactttgtaacagatagcgagaaaatgtcagttgaa
tatgagaactgcaagttgcttctcgtagacaagaaaattacaaatgcgagagatcttatc
aatgttttggaagatgcaattagagggggatatcccatcttgataattgccgaagatatt
gagcaggaagctcttgctacccttgttgtcaataagctcagaggtgcattgaagattgct
gcacttaaagcccctggatttggagaacgcaaaagtcaataccttgatgatatcgccatc
cttactggagcaactgtaataagagatgaggttgggctttccctggataaagctgacaag
gaggttttgggtactgctgctaaagttgtgctaaccaaagattcaaccacgatagttggt
gatggtagcactcaagaagaagtaaccaaacgggttgcacaaatccgtaatctgatcgag
gctgccgagcaggaatatgaaaaggaaaaattaaatgagaggattgcgaagctttccggt
ggagttgctgtcgttcaggttggtgcccaaacagagacagaacttaaagagaagaaatta
agagttgaagatgctctaaatgctaccaaggcagctgtggaggaaggtattgttgttggt
ggtggttgtacccttttgaggcttgcagcaaaggttgatgccatcaaagatactctcgaa
aacgatgaacaaaaggtgggagctgatatagtaaaaagggctctgagttacccattaaaa
ttgattgcaaaaaatgctggagtaaatggaagtgttgtcattgagaaggtactttcaagt
gacaatttcaaatttggttataatgctgcaactggaaattatgaagatttgatggcttct
ggaattattgaccccactaaggtggttaggtgctgcctggagcatgcagcatcagttgca
agaacattccttacttcagatgttgtcgtggttgacatcaaagagccagagccagtgcct
gctgggaatccgatggacaattcaggatatggctactaa
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