Phoenix dactylifera (date palm): 103721013
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Entry
103721013 CDS
T03274
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X2
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103721013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103721013
03016 Transfer RNA biogenesis [BR:
pda03016
]
103721013
03029 Mitochondrial biogenesis [BR:
pda03029
]
103721013
Enzymes [BR:
pda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
103721013
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
103721013
Transfer RNA biogenesis [BR:
pda03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
103721013
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
103721013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
DUF2066
Motif
Other DBs
NCBI-GeneID:
103721013
NCBI-ProteinID:
XP_008809253
UniProt:
A0A8B7CYM6
LinkDB
All DBs
Position
1:3943950..3957099
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AA seq
847 aa
AA seq
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MAPERGHPAPTSSSAPPPPPRILNVQKFAESRGPELEALHAIVSNRLGDDFRIRRSKRRR
TTGHKVTRNRRVKRRKVGDGDGDGGVPEGTSAEDDRKKKVSRRTRRRFEFQKNPASGFCT
SGDGTRRLRTHLWHAKRFAMVKQWGFYLPLGLHGRGRGSRAILKWLKYGALIHDASYSLP
IQLEGPEDSILAILRMVLLPSPSGPTDISEKHSQMVIHGVCYAYAMLYHVGNPLSHFIAP
VIYMWRPFLSDDRNSVQQDDVSNGCCNSGKNGSSTSPRQLWIWLHAAAFNEGFNALRFAC
QKQMHESGKCVSCFTLEGHIARLEIMGSKAIQVLQKTLHPLTDTNSQLQKACVLNRAEHL
PSHAILSLTVDDPRDLPSKGAEPASEAHNRLESNLQEEDIRNSSLLVSGESAKNEDKLLS
LWSEPETSGIFLSDSRSLWDSSDKMSPPIPENVLCTEKHHRRLKFFHFDPTNYGMPATEA
KDDFSQSCPVLLLKHAKQGWSIILPLSWIKPFWMSLILHGAHVIGLRERRWIACNSGLPS
FPFDFPDCKAYMSFMANEASSFDRAAELRPLAVRPVKVPVPPPWDCIMSTVGKGPFILKG
FQTQDVQGSGGVAPECSLVNLASQNVGTLDQATASFQGFIPRTPKILKEYLEKICDGKFL
LFPSMAMMEKDFSDPNPFNWVTRSDHQMSADKELCLVRILLHAYKEGVFEEGAVVCAPIL
TDLSQWTSRSEEQEQLTVTQSFVRSCFTQQDSGKWKLQVPEDPSALHSFRWPIGFVTSGF
VYGSSKPVAVAFCEAKLLAMLRVQQWNQTQETRPEIFVWVRNMRSTAYRRALATIVLEQQ
KEDLEFL
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggagagaggccaccccgctccgacctcctcctccgccccaccccctcctcct
cgaatcctaaacgttcagaaattcgcggaatcgcggggccccgagctcgaagccctccac
gcgatcgtctccaatcggctgggcgatgacttccggatacgaaggagcaagaggcggcgc
accaccgggcacaaggttaccaggaaccggcgcgtgaagcggcggaaggttggggacgga
gacggggacggcggcgtgccggagggcacgagtgcggaggatgatcggaagaagaaggtg
tcccggaggactcgccggagatttgagttccagaagaatccggcttcggggttttgtacg
tcaggggacgggacgaggaggctcaggactcacttatggcacgcgaagcggttcgccatg
gtcaagcagtggggtttttatctccctctaggacttcatggaagaggaagaggttcgagg
gccattttgaagtggttaaaatatggggcactaatacatgatgcatcctacagccttcca
atccaactagaggggccagaggattcaatactggctattttgagaatggttttactgcca
tcaccttcaggacccactgatatttcagaaaaacattcacagatggtaattcatggagta
tgctatgcatatgctatgctttatcatgttggaaatcctctttcccattttattgctccg
gtgatttatatgtggcgaccattcttaagtgatgatcgtaatagtgttcaacaagatgat
gtttcaaatggctgttgcaactctggtaaaaatggaagcagtacatcacccagacagtta
tggatatggttacatgccgcagcttttaatgaaggattcaatgcactgagatttgcatgt
caaaagcagatgcacgaatctggtaaatgtgttagttgttttactcttgagggacacata
gcaaggttggaaattatgggttctaaagcaatacaagttcttcagaagacattgcatcct
ctaacagacaccaactctcagcttcagaaagcctgtgtccttaatcgtgcggagcacctt
ccatcccatgcaattctatctctgacagttgatgatccccgggatttaccatctaaggga
gccgagcctgcgtctgaagctcataatagactggagagtaatttgcaggaagaagatatt
agaaattctagtcttttggtctctggagaatcagccaagaatgaagataaattgttgtca
ctgtggtcagaacctgaaaccagtggcatttttctttctgacagtagaagtttatgggat
tccagtgataagatgagtcctccaattccagaaaatgttctttgcacagagaagcatcat
agacgtttgaaattctttcactttgatcctaccaattatggaatgccagctaccgaagca
aaagatgattttagtcaatcttgccctgttttgcttctaaaacatgctaagcagggatgg
tctatcattctacctttgagttggataaagcctttctggatgtctctcatcctacacggg
gctcatgtgataggtttaagagaaaggcggtggattgcatgcaatagcggcttaccatcc
ttcccatttgattttcctgattgcaaagcttacatgtcattcatggccaatgaagccagt
tcatttgatagagcagctgaactccgtcctcttgcagttagacctgtaaaagtccccgta
ccacctccttgggattgtataatgtctactgttggaaaaggaccctttatattaaaaggt
tttcaaacacaggatgttcaaggctctggtggagtagcccctgaatgttctttggtaaat
ttagcctcccaaaatgttggaacattagaccaagctactgcatccttccaaggctttata
ccaagaacacccaaaattttgaaggagtatttagaaaagatctgtgatgggaagttcctt
ttatttcctagcatggcaatgatggaaaaggacttctctgacccgaacccattcaattgg
gtcactagaagtgatcaccaaatgtctgctgacaaagaactgtgccttgtaagaattttg
cttcatgcatataaggaaggtgtttttgaagaaggtgcggttgtttgcgcgcccattctg
actgacctgtcacaatggacatccaggtcagaggaacaggaacaactaacagtaacccag
tctttcgtaagatcatgtttcacacagcaggattctgggaagtggaagctgcaggtgcct
gaagatccttctgcccttcattcatttaggtggccgatcggtttcgtaacatctgggttt
gtttatggaagtagcaagccggtggcagtagctttctgtgaagcaaagcttcttgctatg
ttgagagtacaacaatggaatcaaacacaggaaacaagaccagaaatctttgtttgggtc
cgcaatatgagatctactgcttaccgacgtgccctggccacaattgttctggagcaacag
aaggaagatctggagtttttgtga
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