Phoenix dactylifera (date palm): 103721148
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Entry
103721148 CDS
T03274
Name
(RefSeq) RNA-binding protein 39-like isoform X3
KO
K13091
RNA-binding protein 23/39
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103721148
Spliceosome [BR:
pda03041
]
Common components
Common spliceosomal components
General mRNP proteins
103721148
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
103721148
NCBI-ProteinID:
XP_026665841
UniProt:
A0A8B8JBZ1
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Position
2:complement(4690518..4716732)
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AA seq
601 aa
AA seq
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MDFDEYEYLEKTVENPEVRKEKEAANGHRDIPNEKGREKISRHRASVDGERDSDDRRSKR
SRSDDGSGRDHDRHRDRERGSSRHRSSPDRERGSSRHRSSPDRDERERQRSGREHRDKDR
DRDRDERKGKERDRDRDRERERAREREREKESERERLRRSRSRSERLREEERERHRERSR
DREYGERERERDRDARRYKEKKEEAAEPEADPERDQRTVFAYQICLKADERDVYEFFSRA
GKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQ
STTSAGGAAVLAGPYSAAARKLYVGNLHFNMTEDQLRQVFEPFGQVELVQLPLDETGHCK
GFGFVQFARLEDAKAAQSLNGQLEIAGRTIKVSTVTDQAGMRDAGANAGDLDDDEGGGLS
LNAHSRAILMQKLDRTGTATSVAGALAAPAVNSAAPTLPTASVLGVPQMVTPLLQPTVPA
LAGLPASGLAVASTTTQPVETVGIPSECLLLKNMFDPNVETEPDFDLDIKEDVQDECSKF
GTVKHIFVDKNSAGNVYLRFDNITSALNAQRALHGRWFAGKMITATFMLPQQYEAKFPSK
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgaatacctagagaagacggtggagaaccccgaggtccgcaaa
gagaaggaggcggccaacggccaccgggacatcccgaatgagaagggccgggagaagatc
tccaggcaccgcgcctccgttgacggcgagcgcgactccgacgaccgccgctcaaagcgg
tcgaggtcggacgacgggagcggccgtgaccacgaccggcatcgcgaccgcgagaggggc
tcgtcccgccaccgctcctcgcccgaccgcgagaggggctcgtctcgccaccgctcctcg
cccgaccgcgacgagagagagcgccagaggagcgggagggagcacagggacaaggatagg
gatagggatagggatgagaggaaggggaaagagcgggacagagaccgagaccgggagagg
gagagggcaagggaacgcgagcgcgagaaagagagcgagagggagcggttacggaggagc
aggagccgctcggagaggcttcgtgaggaggagcgcgagaggcaccgggagaggagcagg
gacagggagtacggagaacgggaaagagaaagagatcgagatgccagacgatacaaagaa
aagaaagaagaagctgcagagccggaggctgatccagaacgagatcaaagaactgtattt
gcctatcagatttgtttgaaggcagatgaaagagatgtgtatgaattcttttcaagggct
ggaaaggtgcgagatgtccgcctcattatggatcgcaactcaagacgctctaaaggggtt
gggtacattgagttctatgatgctatgtcagttcccatggcaatagctctctctggccag
cctcttcttggccaaccagtaatggtcaaaccctcagaggcagaaaagaatcttgtccag
tcaactacttctgcaggcggggcagctgtgcttgctggaccttattcagctgcagctaga
aagttgtatgttggcaatcttcacttcaacatgacagaggatcaacttcgacaggtgttt
gaaccatttggtcaagtggagctggtccagttgccccttgatgagactgggcattgcaag
ggttttggttttgttcagtttgcacgtcttgaagatgccaaagctgctcaaagtttaaat
ggacaactggaaattgctggcaggacaattaaggtttcaactgtaactgaccaagctgga
atgcgagatgctggtgcaaatgctggtgatcttgatgatgatgaaggtggaggcttgtct
ctaaatgctcattctagagctatccttatgcagaagttggaccgtactggcactgcaacc
agtgtcgctggtgctcttgctgctcctgctgtcaactctgcagctccaactctaccaact
gcatcagttcttggtgttcctcaaatggttactccccttctacagcccactgtacctgca
cttgctggattaccagcttcaggtcttgctgttgcttccacaaccacacaacctgttgaa
actgttgggatacctagtgaatgtttgctgctaaagaatatgtttgatccaaatgtagag
acggaaccggattttgatttagatattaaagaagatgttcaagatgaatgctccaagttt
ggcactgtgaagcacatttttgtggacaagaatagtgctggcaatgtatatctgcgtttt
gacaatattacttcagccctgaatgcgcagcgtgcacttcacggaaggtggtttgctgga
aagatgattacagcgacattcatgctcccccagcaatatgaagcaaaatttccaagcaaa
agttaa
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