Phoenix dactylifera (date palm): 103721180
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Entry
103721180 CDS
T03274
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103721180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103721180
Spliceosome [BR:
pda03041
]
Common components
Common spliceosomal components
SR proteins
103721180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
SET_assoc
DbpA
RRM_Nup35
DUF2129
Cucumo_2B
Motif
Other DBs
NCBI-GeneID:
103721180
NCBI-ProteinID:
XP_008809481
UniProt:
A0A8B7CZH3
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Position
18:9119833..9133168
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AA seq
249 aa
AA seq
DB search
MRPIFCGNFEYDARQSDLERLFSRYGRVDRVDMKSGFAFIYMDDERDAEDAIRALDRIEF
GRQGRRLRVEWTKQERGGRRSGSSRRSPTNMKPTKTLFVINFDPINTRMRDLERHFEPYG
KILNIRIRRNFAFIQFESQEDATKALDATNMSKVMDRVISVEYALRDDDERRNGYSPDRR
GRNRSPERRSDRGRSASPYGRGRERASPDYGRGPSPYNKPEQRGSPTYGRAESPDYERYR
SRSPRQERL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccattttctgtggcaactttgagtatgatgctcgccaatctgaccttgagcga
cttttcagcagatacgggagggttgatagggttgatatgaagtcaggattcgcatttatc
tacatggatgatgaacgtgatgcggaggatgcaattcgagcacttgaccggattgaattt
ggtaggcaagggcgacggctacgtgttgagtggacaaagcaagagcgtggtggcaggcgg
tctggcagttcaagaagatctccaaccaatatgaagccaacaaagaccttgtttgtcata
aattttgatccaatcaataccaggatgagagatttggagcggcattttgaaccatatgga
aaaattttgaatattaggattagaagaaactttgccttcatccagtttgagtcacaggag
gatgccaccaaagcattggatgctaccaacatgagcaaggtgatggatcgggttatttca
gtcgagtatgcacttcgtgatgatgatgaaagacgaaatgggtacagccctgatagaaga
ggtcggaacagatctccagaaaggagaagtgatcgtgggcgatctgccagtccttatggt
agaggcagggagagggctagccctgattatggtcgtggtcccagcccatataacaaacct
gaacaaaggggtagtcctacttatggtagagctgaaagccccgattatgagaggtaccgc
agtcgctcacccaggcaggagagattgtaa
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