Phoenix dactylifera (date palm): 103721223
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Entry
103721223 CDS
T03274
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103721223
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
Other 90S particles
103721223
Pre-60S particles
Other pre-60S particles
103721223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
103721223
NCBI-ProteinID:
XP_008809560
UniProt:
A0A8B7CZ56
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MKRRAEREPTAMAGEAEEHEETREGEAEEGEEDADLNCREGSDICQALMDRYAKSSAPQH
RHLCASAAAMRSILQEEGLPLTPPAYFAAAFTAVRDSARADTSATAALASFLSILLPLLP
AGSLPPTKAKDAAFVLAAFLRDPPSGLATGTARSLVKSLGLLVLRVDLEDWGAVELPLET
LLAFAVDRRPKVRRCAQLCVEKVFRTLKNSDVVKKASKVVACMYKKYIPLAKELSSMELS
DAPKSKKLPIPEHMELLHMLNVLTLLIPNLSKKIKIKIFSDAYKLLGCRFSLLTRHTLKL
IDALLRHSEVKVLISESENISSALTSYVSSNEKNPVDTIFAASTLSKIVLNKLHDAQPNM
WIRCLPPIFTSVAGYLGSDANTSKDAAHVLKELINLNIDRRIFLTNASQSCNFEKESSPE
AAAVISISSLFSDLLSTCDVPTEYMLAVISVLFLSLGEFSYNFMKEVLLKLSHWAINVDK
ELQTAKHLQECIGAAIIAMGPEKVLSLIPITFDKEKLTCSNTWLIPILKKYVVGSSLQFF
MEHIVPLAESLQNACDKVKKASKQKNLKSCVHGLWDLLPAFCHYPTDTYHNFKILAKLLM
VVLKEDPSLHEVIAVALQELVNENRSIVQTSQDDNQHGDLSTSLILENLHVESRFSPFHY
SRKTASKNIKALTSSSVDLVETIADVFFDSPPEKRAYLKETIGCLAFLVGSESIHSLFLS
LLEKFDLVGSLVESKELEDPSQDADKKEEVEESANKEKHKENRCLVMELVSSFVEAADKD
LINIFFDFVRSSLLVCDERCQREAYFTLSKILKGHSWFCSARVNELIDLFNSIKAPADSM
ALKNRLSCYHFLLVHMLKRNEENMNTKAFLILNEIILTLKTKKESRKLAYDVLLTISGSL
KNPQSGDAESDLQRLISMVMGYLSSSSPHIISGAISALSLLIYNDADFCLAVPNLLPSVL
VLLQNKDIEVTKAALGFVKVLVSSLQTDKLLKLVPNVVNGILPWSSVSKHHFKSKVAVIL
EIFIRKCGFDAIDIIVPKNCKAFVKTIKEGRRSKKNPKRVARSETAVKSADSVTKGGKKR
VLGDVTGSQEKNSRATTKDQKGRRKKQRKDILSMNETCQTAGRNQLTNGANPSNSESLLE
ARSRENKKRNVIDRPKWRNRATGDHRRDDKKPKHAPAHSKFDPSAKSNKRKMSGNPRGVK
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggagggccgaaagagagcccacggccatggctggagaagccgaagagcacgaa
gaaaccagggagggagaagctgaggaaggcgaagaagacgctgacctcaattgtcgtgag
ggttccgacatctgccaggccctcatggaccgctacgccaagtcctccgccccccagcat
cgccacctctgcgcctccgcagccgccatgcgctccatcctccaagaagaagggctcccc
ctcaccccgcccgcctacttcgccgccgccttcaccgccgtccgcgattccgcccgcgcc
gacaccagcgccaccgccgccctcgcctccttcctctctatcctcctccctctcctccct
gccgggtctttgcccccgaccaaggccaaggacgccgcctttgttctcgcggctttcctt
cgggacccgccgagtggcctggccactgggacggcgcgctccttggtcaagtcgttgggt
ttgctggtgctgcgtgtcgatttggaggactggggagcggttgaattgcctttggagact
cttttggcttttgctgtggaccgacgccctaaggtacgcagatgtgctcaattatgtgtt
gagaaggtctttagaactttgaagaattctgatgttgttaaaaaggcaagcaaagtggtg
gcttgtatgtacaaaaaatacattccattggcaaaagaactcagttctatggaactttca
gatgcacctaaaagtaaaaagctgccaatacctgagcatatggaactcctccatatgcta
aatgtgttgacacttctcattccaaacctctctaagaaaatcaaaataaagatcttttct
gatgcttataagcttctgggttgtcgtttctcattgcttacaagacacactctcaaactt
attgatgcactattgagacactcagaagttaaagttctcatatctgaatcagagaacatt
agttctgctcttacatcctatgtgtcttctaatgagaagaatcctgttgacaccattttt
gctgcatccacattgtcgaaaattgtcttgaacaagcttcacgatgctcagccaaacatg
tggatacgctgtcttcctcctatcttcacttcagttgcaggatatttgggttctgatgcc
aatacttctaaagatgctgcgcatgtcttgaaagaattaattaacttaaatattgatcgg
aggattttcttgactaatgcaagtcaatcatgcaattttgagaaggagagttcccctgag
gcagctgcagttatatctatcagttctctgtttagcgatttgctcagcacttgtgatgta
cctactgagtatatgttggcagtcatttcagttttgtttctcagtcttggtgaattctca
tataactttatgaaggaggttttacttaaattgtcgcattgggcaattaatgtagataag
gaattgcaaactgcaaagcatcttcaggagtgtattggggctgctataattgctatggga
ccagagaaggtgctttcactgatacccatcacttttgacaaggaaaagttaacttgttca
aatacttggctcatacctatactaaagaaatatgtggttggatcatcattgcaatttttt
atggagcatattgtgcccctagcagaatctctacaaaatgcctgtgataaagttaaaaaa
gcatctaagcagaaaaatctgaagtcctgtgttcatggcttatgggatttgcttcctgcc
ttctgccactatccaactgatacttatcataattttaagatcttggccaagctattgatg
gtggttttaaaggaagatccatccttacatgaagtcatagccgtagccttgcaggaactt
gtgaatgaaaacagaagtatagtccaaacaagtcaagatgacaaccagcacggggaccta
tcaactagcctcattttagaaaatcttcatgttgaatctagattttcaccttttcattac
tccaggaaaactgcatctaagaatataaaggccttgacctcgagttctgtggatttagtt
gagactattgcggatgttttctttgattctcctcctgaaaagcgtgcttacctgaaggaa
acaattggctgcttagcttttcttgtcgggagtgaaagcattcatagcctctttctttca
ttattggaaaagtttgatttagtaggttctttagttgaatctaaagaactggaggatcca
agtcaagatgctgataagaaggaagaggtagaagaatcagccaataaggagaaacacaaa
gaaaataggtgtttggttatggagcttgtatcctcatttgttgaagcagctgataaagat
ctcattaatatattttttgattttgtcaggtcttctttattggtttgtgatgagcgttgt
caacgtgaagcatactttactttgagtaaaattttgaaggggcatagttggttttgctca
gctcgagttaatgagttaatcgatctgtttaatagtattaaggcccctgcggatagtatg
gcgttgaaaaatcgtttgtcgtgttaccattttctattggttcacatgttaaagagaaat
gaggagaacatgaacaccaaagcatttttaattctgaatgagattatactcacactaaag
actaagaaagaatctcgaaaactagcatatgatgtactcctgactataagtggcagctta
aagaaccctcagtctggtgatgcagaatcagatcttcaacggttaattagtatggtgatg
ggatatctctctagttcatctcctcacataataagcggagcaatatctgcactttcattg
cttatatacaatgatgctgacttttgtctggctgtgccaaacctgctgccatcagtttta
gttttgctgcaaaacaaagatattgaagtcactaaagcagctttgggcttcgtaaaggtg
ttggtttcctccttgcagaccgataaactactgaaacttgtccctaatgttgtcaatgga
atattgccatggtcatctgtttcaaaacatcatttcaaatcaaaggttgcagtcatcctt
gagatcttcataagaaagtgtggttttgatgccatcgacattattgtgcctaaaaactgc
aaggccttcgttaaaaccattaaagagggtcgccgaagcaagaaaaatcctaagagagtt
gcccgttcagaaacagcagtgaagtcggcagattcagtcaccaaaggagggaagaaaagg
gtacttggtgatgtaactggatcacaagagaagaattccagggcaactaccaaggatcag
aaagggagaagaaagaaacagagaaaagatattttgagcatgaatgagacttgtcaaact
gctggtagaaaccaattgacaaatggtgcaaatccttctaattctgagagtttacttgaa
gcacggtcaagagagaacaaaaagaggaatgtgattgatagaccaaagtggcgcaataga
gcaactggtgaccatagaagggacgacaagaagccgaagcatgccccagcacattccaag
tttgatccatctgccaaatccaacaaacgcaaaatgtcaggaaatccacggggagttaaa
tga
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