Phoenix dactylifera (date palm): 103721243
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Entry
103721243 CDS
T03274
Name
(RefSeq) cullin-4-like isoform X2
KO
K10609
cullin 4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03420
Nucleotide excision repair
pda04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103721243
09124 Replication and repair
03420 Nucleotide excision repair
103721243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103721243
03400 DNA repair and recombination proteins [BR:
pda03400
]
103721243
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103721243
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
103721243
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103721243
TCR (transcription coupled repair) factors
Cul4-CSA complex
103721243
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103721243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
UBA2_C
Motif
Other DBs
NCBI-GeneID:
103721243
NCBI-ProteinID:
XP_017701699
UniProt:
A0A8B7MXL3
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All DBs
Position
11:complement(26236002..26256838)
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AA seq
841 aa
AA seq
DB search
MTHAKRPFSSGGGSTTHGSSSSGGLIGRPLSPSAASSSSMKKAKCQPPSAAAAAAAVERE
KNGLHLHPTRFDPATAQPAEEEDSMLVDQDDLKAGASTDITTTGVAANLSRKKATPPQPS
AKKQLVIKLVKGKPTLPKNFEEDTWATLKSAITAIFLKQPDPCDSEKLYQAVSDLCLHKM
GGNLYQRIQKECEVHISATLSSLVGQSPDLVVFLSLVEKCWQDFCDQMLMIRGIALYLDR
TYVKQTPNVRSLWDMGLQLFRKHLSLCSEVEHKIVTGLLRLIERERLGEAIDRTVLSHLL
KMFTALGIYTESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVESRLHEEHERCLLYL
DANTRKPLVATAEKQLLERHTSAILDKGFTMLMEANRVKDLQRMYMLFQRVNALELLRQA
LSSYIRGTGQGIIMDEEKDKDLVSYLLEFKASLDTIWEESFFRNEAFSNTIKDSFEHLIN
LRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAK
RLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINDSFKQSSQARTKLP
TGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGQCVL
KAEFPKGKKELAVSLFQTVVLMLFNDTQKLSFQDIKDSTGIDDKELRRTLQSLACGKVRV
LQKIPKGREVEDDDAFVFNEEFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDA
AIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYL
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgactcacgcaaagcggcccttctccagcggcggcggcagcaccacccacggcagcagc
tcatccggcggactcatcggaagacccctctccccctccgccgcctcctcctcctccatg
aagaaggccaagtgccagccgccctccgccgccgccgccgccgccgccgtcgagagggag
aagaatggtctccatctccatcccactcgcttcgaccccgccaccgcccagccggcggag
gaggaggattccatgctcgtggaccaggacgacctcaaggccggcgcatccactgacatc
accaccaccggcgtcgccgccaacctgtcgaggaagaaggccacccctccccagccatcg
gctaagaagcagcttgtgatcaagctcgttaaaggtaagccaactctgccaaaaaatttt
gaagaggatacatgggcaactttgaagtctgctattacagctatatttttgaagcagcca
gatccatgtgactctgaaaagctttatcaggctgtcagtgatctttgtctacacaagatg
ggaggaaatctttatcaacgtatacagaaggaatgtgaagtacatatttcggcaacacta
tcctcattggtcggccagagccctgacttggttgtatttttatcattagtagaaaaatgc
tggcaggatttttgtgaccagatgttgatgatacgtggtattgccttatatcttgataga
acttatgtcaagcaaaccccaaatgttcggtcattgtgggacatggggttgcaattgttt
cggaagcatctctctttatgttctgaagttgaacacaagattgtcactggccttttgagg
ttaattgagagggagagactaggtgaagctattgataggacagtactcagtcatctttta
aagatgtttacggctcttggaatttacacagaaagctttgaaaagccctttctggaatgc
acttctgagttttacgctgctgaaggtgtgaaatatatgcaacaatcagatgttccagac
tatttgaagcatgtggagtcaaggctacacgaggaacatgaaagatgcttgctctactta
gatgcaaatacaaggaagccccttgtagcaactgctgaaaaacaactcctggaacgacac
acatctgcaattcttgacaagggatttacaatgctcatggaagcgaatcgagtcaaggac
cttcaaagaatgtacatgctctttcagagggttaatgctctggagctgttaagacaagct
cttagctcgtatattcggggtactgggcaaggtattattatggatgaagagaaagacaaa
gatttggtttcctatcttttagagtttaaagcatctcttgatacaatttgggaagaaagt
ttcttcagaaatgaagctttttcaaataccataaaggattcatttgagcatctcattaac
cttcgtcagaatagaccagctgaactgatcgcaaaatttctggatgagaagcttcgtgct
ggaaacaagggtacatccgaagaagagttggagggtacacttgataaagtgttggttttg
tttaggtttattcaaggaaaagatgtctttgaggcattctataaaaaggatcttgcaaaa
agattattgttgggcaagagtgcatcaattgatgctgaaaagtcaatgatttctaagctc
aaaactgagtgtggaagtcaattcacaaataaacttgaaggaatgttcaaggacatcgag
ttatcgaaagagattaatgattcttttaagcaatcatctcaagccaggacaaaacttcca
actggtattgagatgagtgttcatgtccttacgaccgggtattggccaacatatcctccg
atggatgttcggcttccacatgaactgaatgtttatcaggatatatttaaggagttctat
ttgagtaagtacagtgggaggcgcttgatgtggcaaaattcattaggtcaatgtgtttta
aaagcagaatttccaaaaggcaaaaaggaattggcagtgtcattattccagactgttgta
ttaatgctgttcaatgacactcaaaagctcagtttccaagatattaaagactcaaccggc
attgatgataaagaactgagaaggactttgcagtcacttgcatgtggcaaagtccgagtt
ctccaaaagatccctaaaggaagggaagtagaggatgatgatgcatttgtatttaatgaa
gaattcagtgctcctctctaccgcattaaggtgaatgcaattcaaatgaaggagacagtg
gaagagaacaccagcaccactgaaagggtattccaagaccgtcaatatcaggttgatgcg
gctatcgtccgcatcatgaagacaagaaaagtactaagccacacgcttctaataactgag
ctctttcagcagctcaaatttcctataaaaccagcagacttgaagaaaaggatagagagc
ctcattgatagggaatacctggagcgggacaagaacaatcctcagatctacaattacctg
gcttga
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