Phoenix dactylifera (date palm): 103721292
Help
Entry
103721292 CDS
T03274
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103721292
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103721292
Factors involved in mRNA localization
Other mRNA localization factors
103721292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
103721292
NCBI-ProteinID:
XP_008809659
UniProt:
A0A8B7CZB2
LinkDB
All DBs
Position
2:complement(14374688..14460338)
Genome browser
AA seq
1290 aa
AA seq
DB search
MAIPVEEAIAALSTFSLEDEQPDVQGLSVLLSSERYATNSPIEYGDVAAYRLSLAEDTKA
INQLNTLIQEGKEMASLLYTYRSCVKALPQLPDSMRHSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLINGPTTTHFWSMLKLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDSMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSSEKDSESLYKRVKINRLLNIFKNDIVI
PAFPDLHLSPAAMLKELSMYFPSFSSQTRLLTLPAPHEIPSRELQDYQRHYLIVNHIGSI
RVEHDDFSIRFASAMNQIVILKSTDGADSEWSREAKGNMYDMVVEGFQLLSRWTGRVWEQ
CAWKFSRPCKEPASLDSHDNSTTFFDYEKVVRWNYTTEERKALLELVSYIKSVGLMMQRC
DTLVADALWETIHAEVQDFVQDKLDTMLRTTFRKKKDLSRILSDMRTLSADWMANTSKTE
LELHSLNQGSEETKQNTFYPRPVAPTAAQVHCLQFLICELVSGGNLRKPGGLFGNSGSGI
LVEDLKQLETFFYKLSFFLHILDFTATIGTLTDVGFLWFREFYLESSRVIQFPIECSLPW
MLVDHVIESQDAGLLESILMPFDIYNDSAQHALSVLKQRFLYDEIEAEVDLCFDQLVYKL
NEIIFSYYKSCAASALLDQSFLAACDDGDKYSVKPIRFDEIFKLRRVKVLGRSIDLRNLI
TQRMNKLFRENIDFLLDHFENQDLCAIVELEQLLDVLKLTHRLLSKDLELDSFTLMLNEM
QENLSLVSFSSRVSYQIWNAMQNDFLPNFILCNTTQRFIRSSKGARHAPQKTIILSRKPY
FYCGSQDLNLAYQSLAELYSEFFGIPHMFAIVRLLGSRSLPWIIRALLDYISSKITAIVP
QITGLQEALPKSIGLLPFDAGVAGCQKIIHEQLTWGAKSDLKAEVVHGLKEIGSALYWMS
LLDIVLRQVDMTQFMQVAPWLGLVPGTDGELKQADNGNSPIIKLFKSATNAVLSNPTCPN
PSSFLIMSKQAEAADILYKTVTNVGSVLEYTLAFTSAALDRHYNKWSAAPKTGFIDITTS
KDFYRIFSGLQFGYLEETILDPSKKHELLGDSVAWAGCTIIYLLGQQQHFELFDFSYQFL
NVAEVESGTVPQSLSSERARSANYLQGYENLLEAMKKARRLNNHVFSMLRARCPLEEKVA
CAIKQSGAPLHRVKFANTVSAFETLPQKAA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcctgtcgaagaagccattgccgctctctcgaccttctcactggaggatgag
cagccggatgtgcagggactatctgttttgctgtctagtgagagatacgcaactaatagc
cctatagagtatggtgatgttgctgcttaccgtctatctttagcagaagatacgaaagcc
atcaaccaattgaataccctgattcaagaaggcaaagagatggcatctttgttgtataca
tatcgcagctgcgtcaaagctcttcctcagttgcctgattctatgaggcacagccaagct
gacctgtaccttgagacttatcaagttcttgacttggagatgagtcgcttacgtgaaatt
cagagatggcaagcatctgctgcttctaaactggcagctgacatgcagagattttctagg
cctgaacggctgataaatggacccacaacaactcatttttggtctatgttaaagttgctt
gatgttttattgcaactcgatcatcttaaaaatgctaaggcaagcatacctaatgatttt
tcatggtataagagaacattcacacaagtaagtgctcagtggcaggacactgattcaatg
agagaggagttggatgatctgcagattttcttaagcacaaggtgggctattttactgaac
ttacatgcagagatgttccgcacgaacactgtagaagacattctgcaagtcctcattgtc
ttttgtgttgaatctttggaactagactttgcactcctatttccagagcgccacactcta
cttcgcgtcttgcctgttcttgttgttttggcgacttcgtcagagaaagatagcgaatca
ctgtataagagggtgaaaatcaaccgccttcttaatatatttaagaatgatattgttatt
cctgcatttccagatcttcatctttcacctgctgcaatgttaaaggaactgtcaatgtac
tttccaagtttttctagtcaaactcgtcttcttactcttcctgcaccacatgaaattccc
tctcgtgagctacaagattatcagaggcattatttgattgtgaatcatattggaagtatt
cgtgtggagcatgatgacttctctattcgctttgcttcggccatgaatcagattgtaata
ctgaagtcaacagatggtgcagatagtgagtggtctagggaagccaaaggaaacatgtat
gacatggttgttgaaggttttcagcttcttagtagatggacaggccgggtttgggaacaa
tgtgcttggaaattttcgcgtccatgtaaagaaccagcttctttggattcccacgacaat
tctacaacattttttgattacgaaaaggtggttcgatggaattatacaacagaagaaaga
aaagctctgttagagcttgttagttacataaagagtgttggtttgatgatgcaacgttgt
gacacactggtagcagatgctttgtgggaaacaatccatgcagaggttcaggattttgtg
caggataagttagatacaatgttacggactacgttccgtaaaaagaaagacctatccagg
attctgtccgatatgcgaaccctctcagcagattggatggcaaacacgagcaaaactgaa
ctggaattacattcgttgaatcaaggaagtgaggaaaccaaacagaatacattttatcct
aggccagttgccccaaccgctgctcaggttcattgcttgcaatttctcatctgtgagctc
gtatctggtggaaatctaagaaaacctggagggctttttggaaatagtggctcaggaatt
ttggttgaagatctcaagcaattggagaccttcttttacaagcttagcttttttctgcat
attttggatttcacagcgaccatcggtacattaacagatgttggattcctttggtttaga
gaattctatttggaatcttctcgtgtcattcagtttccaattgaatgctctcttccttgg
atgctggtggatcatgtgattgagtcccaagatgctggacttcttgaaagtattttgatg
ccatttgatatctacaatgattctgctcagcatgcattgagtgtgctgaaacagcgtttc
ctttatgatgaaattgaagctgaggttgatctttgttttgatcagcttgtttataagctc
aatgagattattttttcatactataaaagctgtgcagcaagtgcgttacttgatcagtca
ttcctcgcagcatgtgatgatggggacaaatattctgttaaacctatccgattcgatgag
attttcaagttgaggagagtaaaagtgttgggtaggagtattgatctgagaaacttaatt
actcaaagaatgaacaagttattccgagagaacattgattttctattggaccattttgag
aatcaggatctatgtgccattgtggaactagaacagctcttggatgtcttgaagctcaca
catcggttactttccaaagatcttgaacttgactcatttactttgatgttgaatgagatg
caagagaacctttctcttgtttcattttctagtcgtgtttcttatcagatttggaatgca
atgcaaaatgacttcttgcccaactttatcctctgcaatactactcaacgtttcatccgc
tcttcaaagggagctcgccatgctccacaaaagacaattattttgagcagaaagccttac
ttctattgtggttctcaagatttgaacttggcatatcaaagtcttgccgaactgtactct
gagttctttgggattcctcacatgtttgcaattgtccgacttttaggatccagatcttta
ccttggattattcgagctttactagattatatatcaagtaagataacagcaattgtgcct
caaattactggattacaagaagcattgcctaaatctattggactactgccttttgatgct
ggtgtagcaggctgccaaaagattattcatgaacagctaacctggggagcaaaatcagat
ctcaaagcagaagttgttcatggtttgaaggaaattggtagtgcattgtattggatgagc
cttctagacattgtactgagacaagttgacatgacacaattcatgcaagtagccccatgg
ttaggactggttcctggaactgatggagaattaaagcaggcggataatggcaatagtccc
atcatcaagttattcaaatctgccacaaatgcagtcctatcaaatccaacatgtccaaat
ccatcatctttcctaatcatgtcaaaacaagcagaagctgctgatatcttgtataaaaca
gtcacaaatgttggaagtgtgctagaatatactcttgcttttacaagtgctgcattggat
agacattataataaatggagtgcagcaccaaagacagggttcattgatattacaacttca
aaggatttctatcgcatttttagtggccttcaatttggatacttggaggagaccattctt
gatccatcaaagaaacatgagcttttgggtgactcagtagcttgggctggctgtaccatt
atctacttactaggtcaacaacagcattttgagctttttgacttctcttaccaattcctt
aatgttgcagaagtagaaagcgggacagtccctcagtccctatcttctgaacgggctagg
agtgctaattacttgcaggggtatgagaacctattagaagctatgaagaaagcaagaagg
ctaaacaaccatgtgttctccatgctgagggctcgttgccccctcgaggagaaggtagct
tgtgctatcaagcagagtggcgctccactgcatcgggtgaaattcgccaatactgtatct
gcctttgaaacattgccacagaaagctgcctga
DBGET
integrated database retrieval system