Phoenix dactylifera (date palm): 103721305
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Entry
103721305 CDS
T03274
Name
(RefSeq) RNA-binding protein cabeza-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
pda03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103721305
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103721305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103721305
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103721305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
EIF4E-T
Motif
Other DBs
NCBI-GeneID:
103721305
NCBI-ProteinID:
XP_026665910
UniProt:
A0A8B8JCM1
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Position
7:11012092..11034953
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AA seq
618 aa
AA seq
DB search
MEPGGGGERGGFHRNEAISAVQDEEQLYGEDEDYEDLYNDVNVGEGFLHAVHRSDEPGGY
PREDGSRSNPAPPPPLLPPSGDAPEKVQILGIAGDTKIERPVDGSGGFHAQGFRGGGESA
VAVRPPALPPPVAPPPGGSRPELGQSSGRPSEIQGQSRTSGYGNEGYQRQGGGFGGETRQ
GGGGPAGGGSVNGGGEGAGGTTLFVGELLWWTTDADLEAEVSKYGQLKEVKFFDEKASGK
SKGFCQVDFYDPVAAAACKEGMNGHVFNGRPCVVAFASPHTVRRIGEAQLKNQQMAAQSS
APPQKGRGGGGGPMGGNYGRGGGGGNWGRGGMGNRGPMGNMRNRMGPVGGRGIMGNGGMV
APPPPMLHPGAMLGQGFDPTGYGAVAMGRMGGAYGGFPAGPTTAPFPGLMPSFPPVVAPH
VNPAFFGRGGMAAGGGGMWPDPSMGGWGGEEQSSYGDDAASDQRYGEGSHGKDRGPDRDY
SGVSDRKHDREKDVGPGQEWSERRYHDGREMGRERDRDWERDRERERERERGRDRDREGA
TERERERGRERDRYRDDRDRHGDHYRQKDRELERDDDWNRGRSSMQRSKSREIEHSKRRR
FSPEGCLQGPVVAIILDI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggtggcggcggagaacgaggcgggttccaccgcaacgaggccatctccgcc
gtccaggacgaggagcagctctacggggaggacgaggactacgaggacctctacaacgac
gtcaacgtcggcgagggcttcctccacgccgtccaccggagtgacgagcccggcgggtat
ccgagggaggacgggagcaggagcaaccctgctccgccgccccctctgctcccgccgtcg
ggggatgcgccggagaaggtccagatcctcgggatcgctggcgacacgaagatcgagagg
ccggtggatggatctggtggctttcatgcgcaaggattccggggaggtggagaatcggcg
gtggcggtgcggcccccggcgctgcccccgcccgtggcgccgccgcccggtggaagtagg
cctgagttagggcagtcttctggtcgacccagcgagatccaggggcaatcgaggacctct
ggctatgggaacgagggttatcaaaggcaagggggtggctttggaggtgagacgaggcag
ggaggaggcgggccagcgggaggagggagcgttaatggtggaggagaaggagctggaggg
acgactctctttgtgggggagcttctctggtggacgacggatgctgatctcgaggcagag
gtcagcaagtacgggcagctgaaggaggtgaagttcttcgatgagaaggcgagcgggaag
tcgaaggggttctgccaggtcgatttctatgatccagtggccgctgcagcgtgcaaggag
ggaatgaacgggcacgtcttcaatggccggccctgtgtcgtggcgtttgcatcgccgcac
actgttcgtcggattggagaagctcaactcaagaatcaacagatggcagcccaatcgtca
gcaccgcctcagaaggggagaggagggggaggggggccgatgggtgggaattatgggagg
ggtggtggtggtggtaattgggggaggggtggcatggggaatcgaggaccaatggggaat
atgaggaacaggatggggcctgtgggtggcagaggaatcatgggaaacggcggcatggtt
gctccacctccaccgatgctgcatcctggtgctatgcttggtcaaggttttgatccaact
ggttacggagcagtggctatggggagaatgggtggtgcatatggaggctttcctgcaggg
ccaacgacagctccattcccgggattgatgccttcatttcctccagttgtggctcctcat
gtgaacccggccttcttcgggaggggagggatggccgctggtggtggtgggatgtggcca
gatccaagtatgggtggatggggaggtgaagagcagtcaagttatggggatgatgctgct
tcggaccagcggtatggagaaggaagccatgggaaggatcgaggtcctgaccgggattac
tcgggggtttcagatagaaaacatgacagagagaaggacgtgggtcctgggcaggaatgg
tcggagaggagatatcatgatggaagagaaatgggtagggagagggatcgtgattgggag
agagacagggagagggagagggagagggaaagagggagggacagagacagagagggggca
acagagagggaaagagagagggggagggaaagggataggtatcgggatgacagagaccgt
catggagatcactacaggcaaaaggaccgtgaattggagcgtgatgatgactggaataga
ggaagatcatcgatgcaaagaagcaagtcgcgggagattgagcattcgaagaggcggcgt
ttttcacctgaaggttgcttgcagggacctgttgtagctatcattttagacatatag
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