Phoenix dactylifera (date palm): 103721350
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Entry
103721350 CDS
T03274
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103721350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103721350
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103721350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
103721350
NCBI-ProteinID:
XP_038987868
UniProt:
A0A8B9AVL5
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Position
11:24045299..24065591
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AA seq
806 aa
AA seq
DB search
MITGGQSFVSSPPAFSHDGKKLLVCTGRTVSVFSTSTGMLITELEGHADRVTSIVVIPVA
VAASKFVSYCWTSSLDGIICYWDFSVPELVKKVKVGLPIFSMVIPNVSRNPVGSNEKMST
LFAYLSVEDINKPADQHKALRGQIQIYNLTNSHRVKGLLAETLNPVFISVSKSGEYIGIP
NKRKLHIWKVPGKDCKCDEIKKIKLYHTKKLSTLAFHPYERMVAGGDVTGRILIWRGFGK
RKFSENLQATGKGRTTNEEERPGVRGDDDADSCATWHWHSSEIKFLFFSSDGAYLYSGAK
EGVLVIWQLDTGKRKYKPRLGSPLLYFTDSPDPSLSCISCADNQIHLLKMPTMEIKKSIA
GIKLPFSSPDGYKGLGSEFAYDHAAGLVALPTKDYCVQFFSLYDNLEVSEVQVCEKNFQP
ADDVTIYVALISLSADGFVMGTVDVKLPEERLGGLVSLKFWKHGSRMGEYSLSTVIYEPH
SDAGISALAFRPGHDMAVSSSFGGDFKVWVHSSYTEDTDQMLQKSGWRCQSIGSYKKKPM
TAAAFSADGSVLAVAAGTVVTLWDPDSNILVAIIGDTLSPITRLSFIGKSEYLVSSSKGS
KPQLSVWSTSNLSMYWSYKLFAQDVSCTADGSQFAVLANHNSLDDTTTRDGDGVILLFDV
ENPVPLATWSVQKAKRGGLTFLPPNPSFHDTKCKEGKDTSLLLYINGDHEYVIFDPHSSE
ENQIRRNAQKSQAPPEEAVRFGYASIYGELPDISLKKEQIPEIPFVPSERPWETIFSGSS
HVLPPLTKLCSAFLASLLEKRPSGNE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaggcggccagagcttcgtctcctctcctccggccttctcccacgatgggaag
aagctgttggtctgtacgggccgaaccgtctcggtcttcagcacctccacaggcatgctg
ataacggaactggagggccacgcggaccgcgtcacgtccatcgtggttattccggtggcc
gttgccgcgagtaagtttgtgagctactgctggacctcgtcgttggatggaattatctgt
tattgggatttctcggtgccggagttggtaaagaaggtgaaggtcgggcttccaatcttc
tctatggtaatcccaaacgtatcaagaaatccagttgggagcaatgagaagatgtccact
ctttttgcatatctctcggttgaagatataaacaaaccagctgatcaacataaagcattg
cgcggacagattcagatatacaatttaaccaactcacatcgtgtcaaaggattgttagcc
gagaccctcaacccggtgttcatatctgtgagtaaatctggagaatacataggtattcct
aacaaacgaaaacttcatatatggaaggttcctggaaaagattgtaagtgtgatgaaata
aaaaagatcaagctgtatcacacgaaaaagttgagtactcttgcctttcatccatatgaa
agaatggtggctggaggtgatgtaacagggagaattttgatatggagaggttttggaaag
agaaaattctcagaaaatttacaagcaactggtaaaggaaggactactaatgaggaagaa
agacctggggtgaggggtgatgatgatgcagactcttgcgcaacgtggcattggcattca
agtgaaattaaatttctcttcttctcctctgatggagcttatttgtactcaggtgcgaag
gaaggagttcttgtgatttggcagcttgacacaggaaagaggaagtataagccccgtcta
ggatccccactgttatactttacagattctccagatccttctctttcttgtatatcttgt
gcagataatcaaatacatctattaaaaatgccaacaatggagattaaaaagtctattgca
ggaattaagctacctttctcatctccagatggatataaaggcttaggaagtgagtttgcc
tatgatcatgctgctgggttagttgccctgccaacgaaagattattgtgtgcagttcttc
agcttatatgacaaccttgaggtttctgaggtgcaagtatgtgaaaagaattttcagcct
gctgatgatgtcacaatatatgtggctttgatatctctttccgctgatggctttgtgatg
ggcacagttgatgttaagcttcctgaagaaagattagggggtcttgtaagtctaaaattt
tggaagcatgggtctcggatgggagaatactctctatcaactgttatatatgagcctcac
agtgatgctggaatttctgctcttgcatttcgtcctggccatgacatggctgtgagctct
tcttttggtggtgactttaaggtctgggttcatagttcttacaccgaagatacagatcaa
atgcttcagaaatctggttggagatgccaatctattggttcatacaagaagaaacctatg
accgctgctgccttttctgctgatggatctgttctagctgttgcagcagggactgttgtt
acactgtgggaccctgattcaaatattcttgtggccataattggagatacactctcgcca
atcacaagactttcattcattgggaagtcagaatatctagtatcatcgtcgaagggatca
aaaccacagctatctgtttggagcacatcaaatctgtcaatgtattggtcatacaagctt
tttgcacaagatgtaagctgtacagcggatggatctcaatttgctgtcctggccaatcat
aattcactagatgatactactacaagggatggagatggagtaatattattatttgatgta
gagaatccagttccgttggccacatggtcggtacagaaggcaaagagaggtggcctcact
tttctacctcccaatccatctttccacgatactaaatgtaaagagggaaaagacacttca
ttgctgctatacataaatggtgatcatgaatatgtcatctttgatccacatagcagtgaa
gaaaatcagattaggagaaatgctcagaaaagtcaagcaccacctgaggaagcagtgcgg
tttggatatgcatcaatctatggggagcttcctgacatcagtttgaagaaagaacagatt
ccagaaatcccttttgtcccatcagaaagaccttgggagaccatattcagtgggtcatct
catgttcttccacccctcaccaaactttgttcagcatttttagcatccttgctagaaaag
agaccaagcggcaacgagtga
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