KEGG   Phoenix dactylifera (date palm): 103721385
Entry
103721385         CDS       T03274                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03020  RNA polymerase
pda03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103721385
  09124 Replication and repair
   03420 Nucleotide excision repair
    103721385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pda03021]
    103721385
   03019 Messenger RNA biogenesis [BR:pda03019]
    103721385
   03400 DNA repair and recombination proteins [BR:pda03400]
    103721385
Transcription machinery [BR:pda03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103721385
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103721385
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103721385
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 103721385
NCBI-ProteinID: XP_008809800
UniProt: A0A8B7CZ95
LinkDB
Position
18:8810886..8818466
AA seq 177 aa
MFFHITLERNMQLHPRHFGPHLREKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIR
EGTGFVTFPVKYQCVAFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcttccacataacgctggagcggaacatgcagctccacccccgccacttcggcccc
cacctccgcgagaagctcgtcgccaagctcatgaaggacgtcgagggcacctgcagcggc
cggcatggcttcgtggtggcgatcaccaacgtggaggacatcgggaaaggcctcatccgg
gagggcaccggcttcgtcaccttccctgtcaagtaccagtgcgtcgccttccgccccttc
aagggagagatcctcgaagccgtcgtcaccatggtcaataagatgggattcttcgcggag
gctgggccggtgcagatcttcgtttcgaatcatttgatcccggatgatatggagttccag
tctggggacatgccaaactacacgacatctgatggatcggtcaaaattcaaaaagacagt
gaggtgcggctgaagattattgggacacgggttgatgcaacagaaattttctgcatcggt
accataaaggatgatttcttgggtgtgatcaatgatccaggtgcagcttcttag

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