Phoenix dactylifera (date palm): 103721496
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Entry
103721496 CDS
T03274
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103721496
09122 Translation
03013 Nucleocytoplasmic transport
103721496
03015 mRNA surveillance pathway
103721496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103721496
03041 Spliceosome [BR:
pda03041
]
103721496
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103721496
Spliceosome [BR:
pda03041
]
Common components
Common spliceosomal components
Cap binding complex
103721496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
103721496
NCBI-ProteinID:
XP_008809996
UniProt:
A0A8B7CZT2
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Position
9:16430181..16440112
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AA seq
254 aa
AA seq
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MASLFKDPSKVSAYRDRRFPGSQEEYEHALQTSTTVYLGNLSFYTTEEQIYELFSRAGEI
KKIIMGLDKNTKTPCGFSFVLYYSREDAEDAVKYISGTILDDRPIRVDFDWGFEEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQRELEAQRQLVDYGTGSLGAFQPHMPSHYGRHG
GDRGHGGLHRQSRDYHRKRYRDDDERSAPEMSRRMSDYESRRTSDYDSRPEKNPRFRDSG
DSDDDDDDDRKRRR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggatccaagcaaggtatcggcgtaccgggaccggaggtttccg
ggcagccaagaggagtacgagcacgcgctgcagacgtcgacgaccgtgtacctgggcaac
ctgtcgttctacacgacggaggagcagatttacgagctcttctcccgtgccggagagatc
aagaagatcataatgggcttggataagaacaccaagactccgtgcggcttctcctttgtc
ttgtactattctagggaggatgctgaggatgcagtcaaatatatcagtgggacaattctc
gatgatcgcccgattcgtgtagattttgattggggatttgaagaaggcagacaatggggt
cgtggccgaagtggcggacaagtgagagatgagtatcgcacagattatgatcctggtcgt
ggtggatatggaaagatggtccagagggagctggaagcacagagacagttagtagattat
ggtacagggtcattgggcgctttccaacctcatatgccatcacactatggtagacatggt
ggagaccgtgggcatggaggcttgcacagacaaagtagagattatcatcggaaacggtat
cgggatgatgatgaacgatctgcacctgagatgtcaaggaggatgtctgactatgaatca
aggagaacctcagattatgattccagaccggagaagaacccccgctttcgagatagcggt
gactctgatgatgatgatgatgatgataggaaacggcgtcgttaa
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