Phoenix dactylifera (date palm): 103721589
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Entry
103721589 CDS
T03274
Name
(RefSeq) histone deacetylase 1-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03082
ATP-dependent chromatin remodeling
pda03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103721589
03083 Polycomb repressive complex
103721589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103721589
Enzymes [BR:
pda01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103721589
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103721589
HDAC complexes
Sin3A-HDAC complex
103721589
BRAF-HDAC complex
103721589
REST complex
103721589
SHIP complex
103721589
MiDAC complex
103721589
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103721589
Heterochromatin formation proteins
Other heterochromatin formation proteins
103721589
Chromatin remodeling factors
NuRD complex
103721589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
DUF7505
Motif
Other DBs
NCBI-GeneID:
103721589
NCBI-ProteinID:
XP_008810081
UniProt:
A0A8B7CZX7
LinkDB
All DBs
Position
11:complement(2932312..2940550)
Genome browser
AA seq
506 aa
AA seq
DB search
MESGGNSLATVAGTDGTKRRVCYFYEPEVGNYYYGQGHPMKPHRIRMAHALIANYGLLNR
MQVLRPVPARDRDLCRFHADDYVSFLRSVTPETQHDQIRALRRFNVCDDCPVFDGLYAFC
QTYAGASVGAAVKLNHQHHDIAINWAGGLHHAKRCEASGFCYVNDIVLAILELLKLHERV
LYVDVDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDTGFGKGKHYAVNVPLDD
GIDDDSYQSLFKPIISKVMEVFRPGAVVLQGGADSLSGDRLGCFNLSVKGHAECARYMRS
FNVPLLMVGGGGYTIRNVARCWCYETGVALGIEVDDKVPQHEYYGYFAPDYTLHVAPSNM
ENKNSRQLLDNIRMRILDNLSKLQHAPSVQFQERPPDTELPEYDEDEEDADGRYDPNSDR
EMDDASPVDETSCRPANEIQTIRAEMDIIENEMKDQEPHKLAAEHAKDVEVMDEVMPPCS
KASGIESISVDEPSDTKVEEDKHAAR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgggggtaactccctggcgacggtggccgggacggatgggacgaagcggcgg
gtgtgctacttctacgagccggaggtggggaactactactacgggcaggggcacccgatg
aagccccaccggatccggatggcccacgccctcatcgccaactacggcctcctcaaccgc
atgcaggtcctccgccccgtccccgcccgcgaccgcgacctctgccgcttccacgccgac
gactacgtctccttcctccgctccgtcacccccgagacccagcacgaccagatccgcgcc
ctccgccgcttcaacgtctgcgacgactgccccgtcttcgacggactctatgccttctgc
cagacctacgccggcgcctccgtcggcgccgccgtcaagcttaaccaccagcaccacgac
atcgccatcaactgggccggcggcctccaccacgccaagcgctgcgaggcctccggcttc
tgctacgtcaacgacatcgtcctcgccatcctcgagctcctcaagttgcacgagcgtgtt
ctgtatgtggacgttgatatccaccatggagatggtgtagaggaggcattctacacaact
gatagagtaatgacagtttcttttcataaatttggggattattttcctggaacaggagat
atacgcgatacgggatttgggaaaggaaaacattatgctgtaaatgtacctttagatgat
ggaattgatgatgacagctatcaatctctattcaaacctatcatatcaaaagtaatggag
gtttttaggcctggtgctgtggtgcttcagggtggtgctgattccttatctggagaccga
ttgggttgtttcaacctttcagtcaaagggcatgctgagtgtgccagatacatgaggtcg
tttaatgtgccactgttgatggtgggtggaggtgggtacaccattcggaatgttgctcgc
tgttggtgctatgagacaggagttgctcttggtatagaagttgatgacaaggtgcctcaa
catgaatattatggctattttgctccagactatacccttcatgttgcaccaagtaatatg
gagaataaaaattcacgccagttattggacaatataagaatgaggattctagataatctt
tcaaaactccaacatgctccaagtgtccaatttcaggagcggccacctgatacagagctt
ccagagtatgatgaagatgaagaggatgcagatggaagatatgatcctaattctgataga
gaaatggatgatgcttcccctgtagatgagacatcatgcagacctgcaaatgaaatacag
accataagagccgagatggacatcattgaaaatgaaatgaaagatcaggaaccacacaaa
ttagctgcagaacatgcgaaagatgtagaggtcatggacgaggtgatgccaccatgctcc
aaggcctcaggtatagagtccatatcagttgatgaaccaagtgacacgaaggttgaagaa
gataagcatgctgctcggtga
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