Phoenix dactylifera (date palm): 103721627
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Entry
103721627 CDS
T03274
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103721627
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103721627
Membrane trafficking [BR:
pda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103721627
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103721627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_like
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_Nup120_160
TPR_1
Beta-prop_WDR35_TULP_N
TPR_2
Beta-prop_DCAF12
WD_LRWD1
TPR_GEMI5
HEAT_GCN1
TPR_12
Motif
Other DBs
NCBI-GeneID:
103721627
NCBI-ProteinID:
XP_017701663
UniProt:
A0A8B7MWZ5
LinkDB
All DBs
Position
11:3400784..3419325
Genome browser
AA seq
913 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVSIWNYQTQAMVNSFDLTASPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHADFIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHFVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHSKGVNCVDYFTGGDRPYIITGSDDHTAKVWDYQTKSCVQTLEGHTDNVSAVSFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGCMKGSRRVVIGYDEGTIMIKIG
REVPVASMDNSGKIIWAKHNEIQTVNIKTIGADFEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSRIKIFSKNFQ
ERKSIRPTFSAERIFGGSLLSICSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVSI
ASDTSFYILKYNRDTVFSCLESGKAMDEQGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCIGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDVERASEILPSIPKEHHNSVAHFLESRGMLEDALEVATDPNYKFDLAIQLGRLEVAKA
IALEVRSESKWKQLGELAMSTGKLELAEECLSRAMDLSGLLLLYSALGDANGITKLAYLA
KEQGKNNVSFLCLFLLGRLEECLQLLVESNRFPEAALMARSYLPSKVSEIVAIWKNDLNK
VNQKAAESLADPEEYPNLFEDWQVVLAIESNLAHDRDDYPPAQEYLSYAEKSNINLVEAF
KVMRVDEGNLPLANGDSGHEVVDENIEEDGQLEAVEADANDSTDNAILINGNEGGEELLK
NIEQTPSAQEQLA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactagaaattaagaggaaactcgctcaaaggtcagaaagagtaaaatct
gtggatctgcatccaacagagccatggattctcgcaagtctttattctggaagtgtcagc
atctggaactaccaaacacaggctatggtgaactcttttgacttgactgcatcacctgtg
cggtcagcaaaatttatagcacgcaaacagtgggttgttgctggagcagatgatatgttc
attcgggtgtacaattataatacgatggacaaggtcaaagtctttgaagcacacgcagac
ttcattaggtgtgtggctgtccacccaacacttccatatgtgctgtcatcatctgatgac
atgctgataaagctttgggactgggagaaaggttggatgtgtactcagatttttgagggg
cattctcattttgtgatgcaagtcacttttaatccaaaagacaccaatactttcgcaagt
gcctcccttgatcgcacgataaagatctggaatcttggttcaccagacccaaattttaca
ttagatgctcattccaagggagtaaattgtgttgactactttactggtggggataggcct
tatataattactggttctgatgaccatactgcaaaggtctgggattaccaaaccaagagt
tgtgttcaaacgctggaaggccatacggacaatgtttcagctgtctcttttcatcctgag
ctcccaataataataacaggttctgaagatggaactgttaggatatggcatgcgactact
tatcgcctcgagaacacactaaattatggtcttgaacgagtttgggcagtgggatgcatg
aaaggatcaaggagggttgttattggttatgatgaaggaaccataatgataaaaattggc
cgtgaagtaccagttgctagtatggacaacagtgggaaaatcatatgggcaaagcataat
gaaattcaaactgtaaacataaaaacgattggtgcagactttgaggtgacggatggagaa
agattgcctttggctgtgaaggaattggggagttgtgatctttatccacaaagtcttaag
cacaaccccaatggaagatttgttgttgtctgcggagatggagaatacattatatatact
gctttggcatggagaaatagatcatttggctctgccttggaatttgtctggtcatctgat
ggagagtatgcagttagggaaagtacttcaagaattaagatattcagcaagaactttcag
gaaaggaaaagtatacgccctaccttctcagcagaacgtatttttgggggaagtctgctg
tctatatgctccaatgattttatttgcttttatgattgggctgaatgcagactaattcgg
cggattgatgtgaatgtcaaaaatctttattgggctgatagcggtgacctagtttcaatt
gctagtgatacatcattttacatcctgaagtataatagagacactgttttttcttgtctg
gagagtggaaaggcaatggatgagcaaggtgttgaggatgcatttgagcttcttcatgaa
ataaatgagcgggtccggacaggactatgggttggagactgtttcatctacaataattca
tcttggagattaaactattgtattggtggagaggtcaccactatgttccacctggaccgg
cctatgtacttgctcggatatcttgctagtcaaagtcgggtgtatcttattgacaaggag
ttcaatgtcatggggtacaccttactccttagtttgattgagtataaaacacttgtgatg
cgtggggatgtggagcgtgcaagtgaaattttaccatcaattcccaaggaacatcataat
agtgtagctcatttcttggagtctcgtggcatgctagaggatgctttggaagtagctact
gatccaaattacaaatttgatctggctattcaacttgggaggttagaggttgcgaaggca
atagcacttgaagtgcgaagtgaatctaaatggaaacagttgggagaattagctatgtct
actggaaagttagagctggctgaggaatgtttgtcacgtgcaatggatttgagtggatta
ttgcttctttactctgctcttggtgatgccaatggaataaccaaacttgcatatcttgct
aaagagcaagggaaaaacaatgtttcattcctttgtctatttttgctaggcagattggaa
gagtgccttcagctattggttgagagcaatcgttttcctgaagcagcattaatggcacga
tcctacctgccaagcaaagtctctgagattgttgcaatttggaaaaatgatctgaacaag
gtcaatcagaaagctgctgagtctttggctgatcctgaagagtacccaaatctatttgag
gactggcaggttgttcttgccatcgagtctaatcttgcccatgacagggatgattatcct
cctgctcaggaatatttaagctatgctgaaaagtcaaatatcaatcttgtggaagcattc
aaagtcatgcgagtagatgaagggaatttgcctcttgcaaatggagattctggccatgag
gtagtggatgagaatatagaagaggatggccaattagaagctgtcgaagctgatgccaat
gattctacagataatgcaatcctcatcaatgggaatgagggtggcgaagagttgcttaaa
aatattgaacaaactccatcagcccaagagcagttggcttga
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