KEGG   Phoenix dactylifera (date palm): 103721891
Entry
103721891         CDS       T03274                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pda03036]
    103721891
   03400 DNA repair and recombination proteins [BR:pda03400]
    103721891
Chromosome and associated proteins [BR:pda03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103721891
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103721891
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ TMEM_230_134
Other DBs
NCBI-GeneID: 103721891
NCBI-ProteinID: XP_008810490
UniProt: A0A8B7D0I3
LinkDB
Position
4:5495484..5527359
AA seq 1153 aa
MDKTSSWISHIEAFVDSSCAPKQQAASVDAIAALVKKDLLTLEALVREMELYLTTSDHSI
RARGMLLLAEILNCLISKPLDSATVSSLVEFFTSKLADWQVLHGALIGCLALLRRKKNVG
MVKSSEARALAESYLTNVQVQSLAVHDRKLCFEVLQCLLEAYPEAVEMLGDDLVYGICEA
IDEEKDPRCLMLTFHLVEILARVFPDSSGAVASFAGDLFDILSRYFPIYFTHPRSDDFDI
TREDLSRALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGTDRMIK
HAGAIWSNLKDAIFNHSPHKTLSSTSEAAGNTESEENQIAKEALICLQTAILHLDSLEKD
PILSLIVEDEDIEMKFGLVSNEGACTGISIESWRQLSAVGNILSVSSKASMSGCTRVFQK
FFPRLMNILEVSASSSSYGCNTKNRTSSLNFGALYLCIQLLASCRELTLTSQDFSPQVTT
VQDTWWSMLQHFSGPLVHALGSALVAVGSSELVSNNTGHEHAIYEVKGLQVLAMFPGCYL
PISEDVYEYILVILVSMVTERFEDTFLWKLSVKALIEIGSFIEKHHDSYRGISFNRIVVE
RIVSLFQHDDSTMPLALKLDAISEIGTIGVDYMSRVIRLLEEAILSKFLAVCVEGCLEAA
EILVPLLECYSNRVLAWCYTSGNFDEVAMRFALCIWDQMESITIFDKDVKLKDLLDRVMM
TMKLLVWGCVEESQSLIVRKAYSVLLSTTFLSEESLSFSPSKLEGLQLTPDLVNLSWRDE
WIVSLFASVVMALLPQTPLPDVKLLSNMLTTFLLKGHLPAAQALASMVNKWHVNIDKSEV
SSAYTLDEAIEMILERSLLSIQSSSNLGKSDLLNNGERMLSCLCLLNKNSSFQNNAVVGL
AWIGKGLLMRGHEKVKEIAMLLLKYLLSNPYKELHSDVSGSGDGLDVHTSLATSAADAFH
VILSDSEVCLNKKFHATIRPLYKQRFFSSMMPVLLSSIKQSRLLSMRVALCRAFAHVISD
APLAAVVAEAKKIVPSLMDSFAMLSEDVLNKDLIYSLLLVLSGILMDDNGKEAIIENINT
VISHLIRLIFYPHMMLVRETAIQCLVAMSGLPHARIYPMRPQVLRAVSKALDDQKRAVRQ
EAVRCRQAWVSMA
NT seq 3462 nt   +upstreamnt  +downstreamnt
atggacaagacgagttcatggatttctcacatcgaagccttcgtcgattcctcgtgcgct
cccaaacagcaggctgcaagtgttgatgctattgctgcattggtgaagaaggacctctta
actctggaggcattggtaagagagatggaactgtatctaaccacctcagatcattctatt
cgtgctagaggtatgcttctcttagcagaaattcttaactgtctcatatcaaaaccatta
gacagtgccactgtaagtagcctggtagagttctttacatcaaagctggcagattggcaa
gtcttacatggagcacttattggttgcttggctcttttgagaaggaagaaaaatgttggt
atggttaaaagtagtgaagcaagggcacttgctgagtcttacttaacgaacgtacaagta
cagtcactagcagtgcatgatcgtaagttatgcttcgaagttcttcagtgcctattggag
gcctacccagaggctgttgagatgctgggtgatgacctcgtttatggaatatgtgaagca
attgatgaagaaaaagatcctcgatgcttgatgctaacttttcatctagtggaaatcctg
gcacgagtatttcctgattcatctggtgcagtagcaagttttgctggggatctttttgat
attttaagtagatattttcctatatatttcacacatccaagaagtgatgatttcgacatt
acaagggaagacctttctagggcacttatgcatgccttctgttcaactccattttttgag
ccatttgcaatcccgctgctgcttgagaaactttcctcctctcttccattagctaagctc
gattctttgaagtatcttaacaattgcatacagcactatggaactgatagaatgatcaag
catgctggagctatttggtctaatttaaaagatgcgatctttaaccattcgccacacaaa
actctatcttcgacttcagaagcagctggaaatacggaatctgaggaaaatcaaattgca
aaagaagctctaatttgtctgcaaacagctattttgcatttagactctctagagaaagat
cctattttgagtttgattgttgaagatgaagatattgaaatgaagtttgggcttgtcagc
aatgaaggggcttgtacaggcatatccattgaaagctggcgccaactgagtgctgttgga
aatatcttatcagtctcatcaaaagcctccatgtctggctgcacaagagtgtttcagaaa
ttttttcctcgcttgatgaatattttggaagtttctgctagcagctcatcttatggttgc
aatacaaaaaatagaactagtagcttgaattttggagcgctttatctctgcattcaactc
cttgcttcatgtagggaattgacattgacttctcaagacttctcacctcaagttactaca
gtgcaagacacctggtggtccatgcttcaacatttctctggtccattagttcatgctctt
ggatcagccctggtggcggttggaagctctgaacttgtgagtaacaacactggacatgaa
catgccatttatgaggtaaagggcttgcaggtacttgcaatgtttccaggatgctacttg
cctatatctgaggatgtttatgaatatatcttggtgatcctcgtgtcaatggtcactgaa
aggtttgaagacacattcttgtggaaattatcggtgaaagcattgatcgaaattggttca
tttattgaaaagcatcatgattcttatagaggaataagctttaacagaattgttgttgaa
aggattgtttctttgtttcaacatgatgattctaccatgcctcttgcactaaaactggat
gcaatttctgaaattggtactattggggtagattacatgtcaagagtaattagattgctt
gaagaagctattctttccaaatttttagctgtctgtgttgaaggatgtcttgaagctgct
gagattttagttcctctgcttgagtgctactccaatcgggtgcttgcgtggtgctacact
tctggtaattttgatgaagttgcaatgcggtttgctctatgtatctgggaccaaatggaa
agcatcactatttttgacaaagatgtaaaacttaaggatcttcttgatagagtaatgatg
acaatgaagcttctagtttggggttgtgttgaggaaagtcaatccttgatagtgcggaaa
gcctatagtgttcttttatctacgacctttctttcagaggagtcattgtcattttctcca
tccaagttagaagggttacagttaactccagatttagttaacctgtcatggagagatgaa
tggattgtatctctctttgcatcagtagtgatggcgcttcttccacaaacacctctgcca
gatgtaaaattgttgtcgaatatgcttacgactttcctacttaaaggacatctgccagca
gctcaagcattggcttctatggttaacaaatggcatgtaaatattgataaatcagaagtg
tcaagtgcttatacattggatgaagcaattgaaatgattcttgagaggagtttattgagt
atccaaagcagtagtaatttgggaaagtctgatcttttgaacaatggtgagagaatgctt
agttgtttatgtctcttaaacaagaacagttcttttcaaaataatgcagtggttggacta
gcatggattggaaaaggtctgcttatgagaggtcatgaaaaagtaaaggaaatagcaatg
cttttgttaaaatatttgctttcaaatccatataaggaattacactctgatgtatctgga
agtggtgatgggctggatgtgcatacttctctagcaacatctgccgcagatgcattccat
gtaattctgagtgattcagaagtttgcttgaataaaaaattccatgcaacgataagacca
ctttataaacaacgtttcttctcaagcatgatgcctgtcctgctctcatcaatcaaacaa
tctcgcttgttgagtatgagagtggcattgtgtcgagcttttgcgcatgttatatcagat
gctccactagctgcagtggttgctgaagcgaagaagatcgtaccctcattaatggatagc
tttgccatgttgagtgaggatgttctgaataaagatctaatatacagcctgctgctggtc
ctatctgggatcctgatggatgataatggaaaagaagccatcatagagaacatcaatacc
gttataagtcacctcatcagactgattttctatccccatatgatgcttgttcgggagacg
gcaattcaatgtcttgtagccatgtcaggccttcctcatgcaaggatctatcccatgagg
cctcaggtcctacgggctgtatcaaaagctcttgatgatcagaaaagggctgtccgtcaa
gaggctgtgagatgtcgtcaagcatgggtatcaatggcatga

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