Phoenix dactylifera (date palm): 103721930
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Entry
103721930 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103721930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103721930
03036 Chromosome and associated proteins [BR:
pda03036
]
103721930
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103721930
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103721930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
103721930
NCBI-ProteinID:
XP_038975927
UniProt:
A0A8B8ZRF1
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MFSPAARKPHLASQKDRNLGHAVLDSPATPLPESSRSVFGASIPNRPITGTPAPWSSRLS
VLARIPTEKKTEKGVDANQTQPVYVGEFPQVVRSAQANLLQKSVANNTVLAGGMDEGTSL
AWIICGRQIFIWSYLSAAVSKNCVALEIPSSAFGDKDDMKFMHGNHWMVCVVGWDIASSS
SETMLGQCSSAGIVVCNQMTKAIVYWPDVFSDSENIPIASLPMPESGESDLTSDGRKAAN
RNHGSNCVGSDNLSEHDRVNSIIVTAIPGNYHECIAIACQSNGDLWLFRLTSARICQRRI
SHDAVGISSGHSQMNKRHARSLIWRSLHACPKESGRQFXLLTDCEIQCWNIMLAPDINIT
KLWIHEIVADDGDLGIKKDLAGQKHIWLLDVQVDRRGKEFTVLVATLCKDRVSSSSYMQY
SLLTMQYKFGQNFSLENSGSTNERVLEKKAPLQVIIPKARVEDEEFLFSMRLRVGGKPSG
SAIILSGDGTATVTNYWRGSTRLYQFDLPWDAGKVLDASVFPSSEDNQEGAWVVLTEKAG
VWAIPEKAVLLGGVEPPERSLSRKGSSNEGVVEEEKGSQAFGVNVDPRKATSEAWIAGDR
QRAVFMSIAQRTAQDEEAEALLGCLFHEFILSGKVEGALEKLRKKGAFEKEGEINVFTRM
SKSIVDTLAKHWTTTRGAEFVASAVVSSLLLDKQQKHQKYLQFLALSKCHEELSSRQRHS
LLTIMEHGEKLSGMIQLRELQNSHSQNRSNVVDSPSHSQIQTAGSLWNLIQLVGEKARRN
TVLLMDRDNAEVFYSRVSDIEEMFSCLSHQLQYVIGGEKLFFIQMQRACEISNACTTLIH
TALRYRYEHKNWYPSPEGLTPWNCQPVVRSGLWSIASFVMQLLKDAVAVDLSMKSKLWSE
LEELTDVLLEAYTGIITAKIECGGEHKGLVEEYCIRRDELLGSLYELAKRFVEAKYQDSC
KGIDDPSLKEVIFREVTSSILSIAQRHEGYKTLWHICYDLSDTGLLRSLMHDSVGPKGGF
SSFVFKQLIKSHQYAKLLRLGEEFQDELASFLKEHKDLLWLHEIFLNQFSSASETLHALA
LSIGDGSSLLIDEELELAQSKRVPSLVDRRCLLNLSKIAAVAGKNVGFEMKVRCIEADLQ
ILKLQEILGHLTDNKEGLDTKKPLPPGELIELCLRGGPELALKAFEVFAWTSSSFRSSNR
SLLEECWKNAADQDDWAALCQASTAEGWSDEIVLESLKNTLLFKASNRCYGPGAETYDGD
FEEVLPLQKEDMGFPNLRDVSSSVEGLLMQHKDFPDAGKLMLTAIIMGKEGNDAVVEEDM
AMDSR
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccggcggcgaggaaaccccacctcgcctctcagaaggaccggaatcttggg
cacgctgtcctcgattcccccgcgacgcctcttccagagagcagccggtcggtcttcggc
gcttccatccccaaccggccgatcaccggcacaccggctccgtggtcttctcgcctgtcc
gttctcgccaggattccaactgagaagaaaactgagaagggggttgatgcaaatcaaacc
caacctgtatatgttggagagtttccccaagttgttcgcagtgctcaagcaaatcttctg
caaaagagtgttgctaataacacggtgcttgctggtggtatggatgagggaacatccctt
gcttggataatatgtggaaggcagatttttatttggagctacttatcagctgcagtttca
aaaaattgtgttgcacttgaaatcccatcttctgcatttggggacaaagatgacatgaag
ttcatgcatggtaatcactggatggtctgtgttgtcggatgggatattgcatcatcaagc
agtgaaacaatgttagggcaatgcagctctgctggcatagtcgtttgtaaccaaatgact
aaagctattgtatattggccggatgtcttctcagacagtgaaaacattccaattgctagc
ttaccaatgccagaatctggagaaagtgatttgactagtgatggaaggaaagctgccaac
cggaaccatggaagcaattgtgttggaagtgataacttgtctgaacatgatagagttaat
tcaattatcgtgactgcaattcctggtaattatcatgaatgtattgcaatagcgtgtcaa
tcaaatggtgacttgtggttgtttcgtttgacatcggccagaatatgtcagagaagaatt
tctcatgatgcagtaggaattagttctggtcattctcagatgaataaaaggcatgcaagg
tcattaatctggcgttctttgcatgcttgccccaaggaatctggtcggcagtttnttttg
ttgacagattgtgagattcagtgttggaatattatgcttgcacctgatattaatatcaca
aaactttggattcatgaaatcgtagctgatgatggtgatttaggtatcaagaaagatcta
gctggccagaagcacatctggcttttggatgtgcaggtggatcgccgtgggaaagaattt
actgttcttgtagctaccttgtgtaaagatcgggtaagcagttcaagctacatgcagtat
tctcttctaacaatgcaatataagtttggtcaaaatttctctttggaaaatagtggatca
acgaatgaaagggttctagagaaaaaagctcctcttcaggtaataattccaaaggcaaga
gtggaagatgaagaattcttgttttctatgcggctacgagttggtggcaagccatctggc
tcagcaattatactgtctggggatggaactgctactgtaaccaactattggaggggttcc
actcgactttatcagtttgatttaccatgggatgcaggaaaagttttagatgcttctgtt
ttcccttcttcagaagacaatcaggaaggagcttgggttgttcttactgaaaaagcagga
gtttgggcaatacctgaaaaggcagtcttacttggtggggttgaaccacctgagcgaagt
ttgtcacgtaaggggagctcaaatgaaggcgttgtggaagaagaaaaaggaagccaggct
tttggtgtcaatgttgatcctaggaaggctacttctgaggcatggattgctggagataga
caaagggcagtctttatgagcattgcacaacgaactgcccaagatgaagaagcagaagca
ttgctaggttgtttgtttcatgagtttattttgtctggtaaagttgaaggtgcgctagag
aagctaaggaaaaaaggagcatttgaaaaggaaggtgaaatcaatgttttcacccgcatg
agcaaatctattgttgacactttagctaagcactggacaacaaccagaggagctgaattt
gtggcttcagctgttgtgtcttctttacttttggataagcagcagaagcatcagaaatac
cttcagtttcttgctttgtccaagtgccatgaggaactttcttccaggcagagacattct
ttgctaactatcatggaacatggtgaaaagctttctggcatgatccagcttagggagtta
caaaattcacatagtcagaatcggtcaaatgtggttgactctccatctcactcgcagatt
caaactgctggttctttatggaacctcattcaattagttggtgagaaagctcgcagaaat
actgttcttcttatggatcgagataatgctgaagtattctatagtagagtttctgacata
gaggagatgttttcttgtttatctcatcaacttcaatatgtaattggtggagagaagctg
ttttttattcagatgcaacgagcttgtgaaatctcaaatgcctgcacaacattaattcat
actgctttgcgctatagatatgagcacaagaactggtatccttctcctgagggattgaca
ccttggaattgccaacctgttgtacggtcaggcctttggagcatagcatcttttgtaatg
cagcttttaaaggatgctgttgcagtcgatctgtcaatgaaatcaaaattatggtctgaa
ttagaagaactcacagatgttttacttgaggcatatactggtataatcactgctaaaatt
gaatgtgggggagaacacaaaggtttggtagaagagtactgtataagaagagatgaactt
ctcggctccctatatgaactagccaaaagatttgtagaagctaaataccaggattcatgc
aagggcattgatgatcccagtctaaaagaagttatttttcgagaggttacttcatcaatt
ctttcaattgcccagcgacacgaaggctacaaaaccttgtggcatatatgttatgacctt
agtgatacagggctcctccgtagcctaatgcatgacagtgttgggccgaaaggaggtttc
agctctttcgtctttaaacaactgattaagagtcatcagtatgctaagttgctgaggctt
ggagaagaattccaggatgagctagctagttttttgaaagagcataaagatctgttatgg
cttcatgagatatttttaaaccaattctcctctgcttcagaaactcttcatgcattggct
ctatccattggtgatggctcttcattgttgattgatgaggaactagagcttgcacagtcg
aagagagtgccatctcttgttgatagaaggtgcctacttaatctctccaaaattgctgca
gtggcaggaaaaaatgtgggttttgagatgaaggtcagatgcattgaagctgatttgcag
attctaaagttgcaggaaattttgggccatcttacagacaataaagaaggcctggatact
aaaaagccacttcctccgggagaactaattgagctgtgcttaagagggggtccggaacta
gctttaaaagcttttgaggtgtttgcttggacaagctcatccttccgtagttccaacaga
agccttttggaggagtgctggaagaatgcagcagatcaagatgattgggctgcgctttgc
caggcatcaacagcagaaggatggagtgatgaaattgtcttagaatctctgaaaaacact
ctgctttttaaggcttcaaaccggtgctatggacctggagcggagacctatgatggtgac
tttgaggaagtattgcctctccaaaaggaggatatgggatttccaaatttaagagatgta
agttcttcagtagaaggacttctgatgcagcacaaggattttcctgatgcaggtaagctg
atgctgactgcaatcatcatgggtaaggaaggaaatgatgctgtagttgaagaggacatg
gctatggattcccgataa
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