Phoenix dactylifera (date palm): 103722018
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Entry
103722018 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103722018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103722018
03036 Chromosome and associated proteins [BR:
pda03036
]
103722018
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103722018
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103722018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
103722018
NCBI-ProteinID:
XP_008810655
UniProt:
A0A8B7D182
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Position
11:13411785..13422238
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AA seq
720 aa
AA seq
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MPGLASDPGDSLVPFPPDVRDPVVYPVRHGVNAPIFRVYVSWTRGNLLQVACLRPPEADP
AGGEEDEVSDEEIGGKIVEVKLGAGDGEISEAQRRRIAYGSVPAFALLQSRKNSLAAMSR
MSASSIRTEWWEHVLDYSHHISDLLGNPMLPSSTVIEDPETVMQPHEEPTRLKAAWQLME
IFYVDKLSLTWLPERLVDWLADYDSLLTRTETTIHSKLAGLQKRLVNLQVVEDDPEYWEV
MSLALAVGWLDTVVKLLRLHGSYQLDQLGSRETENGLVEAVAVLVSTMPRMRPHLPTGRL
GQCYKTKPEFIKAWEKWRGHISKLDSSAFWVQCSHRQTREGLRNLLQIMLGKVSNLTSAT
CHWMELFISHFLYIRPFTMGLEGFHSLSQKCMQLRPSSSSSGLMCLLIGILGENPEVVLA
ECSKTFGPWMVVHAMELLTADNGHADILLHEERYNLGDISIEELHRLVYAQVLSSHPLTW
QIAPTYLASCPKQGLGLLEILLYKQPVQHYQMILKNLEICRLYELENISSSIMKIAGTYH
WKHGRKGSGVYWLQQARDEVRLNKIAQQLFEYIGKSISDDSFKQWEGLIELLGSQVGTAG
GLEFLHKYRDFKRSLQQVQDGSSVDAARQTMESLIQLMKNPSTPQRFWLPLLHDSVKLLH
WKAQPLLTVSETNLLLNKLQELSMAKLCPDFCEPNLPPEALSSVRLALATNLGRAILEEC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccttgcgtcggatcccggcgattccctcgtcccattcccgccggatgtccgg
gacccggtcgtctaccccgtccgccacggtgtcaatgccccgatcttccgcgtttacgtc
tcctggacccgggggaacctccttcaagtcgcgtgccttcgtcctccggaggcggacccc
gctggcggcgaagaggacgaagtttcggatgaagaaatcggcgggaaaatagtggaggtc
aagctcggcgccggtgacggggagatcagtgaggctcagaggcggaggatcgcttatggc
tccgttcctgccttcgcgctgctccagagtcggaagaattcactcgcggccatgtcaagg
atgtctgcatcttcgattcgcacggaatggtgggaacatgttttggattacagtcatcac
ataagtgaccttcttgggaatcctatgcttccttctagcacagtgattgaggacccagag
acggttatgcagcctcatgaggaacctaccagattaaaggcggcatggcagctaatggaa
atattttatgtggataagctgtcactaacttggcttccagagcgccttgtcgattggtta
gcagattatgacagcctcctgaccaggacagagactacaatccattcaaagcttgcaggc
ctgcaaaaaaggcttgtcaatttacaggtagttgaggatgatcctgagtactgggaagta
atgtcattagcacttgcagttgggtggcttgacactgtggtgaaattgttgagactacat
ggatcttatcaactggatcaacttggcagccgtgagacagaaaatgggctggtagaggca
gttgctgttcttgtctccacaatgccacgcatgcgtcctcatctaccaactggaagatta
ggtcaatgctataaaaccaaaccggagtttatcaaggcatgggagaaatggcggggccat
ataagtaaattagattctagtgcattttgggttcaatgcagccatcgccaaactcgggaa
ggtttgaggaatttgttacagatcatgttgggtaaagttagcaatcttacatctgcaact
tgtcactggatggagctgtttatatctcactttctctacataaggccattcacaatgggc
ctagaagggttccatagcttatctcagaaatgcatgcaattgagaccatcctctagttct
agcgggctgatgtgcctcctcattggtattcttggagaaaatcctgaggttgtgttagca
gaatgctcaaagacatttggaccatggatggttgtccatgccatggaattgttgacagcc
gataatggtcatgctgacattctgttgcatgaggagaggtataacttgggagatatcagc
atagaggaactccaccgacttgtatatgctcaagttttgtcttctcatcctttgacttgg
caaattgcaccaacatatctagcatcatgcccaaagcaaggtttgggtctgttagagatt
ttactgtacaaacagcctgtgcaacattatcaaatgatacttaagaatctagagatttgc
cgtttatatgaattggaaaacatcagttcaagtattatgaagattgctggcacataccac
tggaagcatggtagaaagggttctggtgtttactggcttcaacaagctcgtgatgaagtt
cggctgaacaaaattgctcaacagctatttgaatatattgggaagtcgatatctgatgac
agtttcaagcaatgggagggattaattgaacttcttggttcgcaagttgggactgcagga
ggcctcgaatttctccacaagtatcgggattttaagaggtcccttcagcaggtgcaagat
ggaagttctgttgatgctgctcggcagactatggaatcacttatacagcttatgaaaaat
ccatcaacaccacaacgtttctggcttcctctactgcatgattcagttaagttgctacac
tggaaggctcagccgctattgactgtatccgaaacgaatctattattgaacaaactgcaa
gaattatccatggcgaagctgtgcccagatttctgtgaacccaacttgccacctgaggcc
ttaagctctgtccgattggctctggctacaaatctggggcgtgctattcttgaggaatgc
tga
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