Phoenix dactylifera (date palm): 103722153
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Entry
103722153 CDS
T03274
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103722153
Transcription machinery [BR:
pda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103722153
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
103722153
NCBI-ProteinID:
XP_008810822
UniProt:
A0A8B7D122
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Position
4:4309856..4315921
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AA seq
498 aa
AA seq
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MGAVTVPSSASQTPFGAGARLSARRLPAPRRPFLCLAFRADWTAKCSAAAIPSEAVKPPQ
KSSKRAQAASVDAPPTATQDLDYNEVAAALENIYKLSPAEVSDVEEADRRGRRRRGRSRK
RAKEGDGEEGNVVRNRKRRVRRLSLEKRIASRRRKDEEVEAAAARDERRDLDEDGEKLLR
EYSVSTDLASLDWKKMKIPPVLSSAEHNRLFELMQPMKAIFEVKKNLDKDLNREPTDAEL
AVAVNMTVPRLRRHIEVGQAARNMLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKG
LITAIDRFEPKRGFRLSTYGLFWIRHSITRSMTVSSFTRVPFGIESVRQEIQKAKLELQF
ELGRLPKDEEIIDRVKISPERYHDVMKAAKPIFSLHARHAVTQEEFIDGITDMDGVGGDK
HRQRALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELK
AFMKLKHPARVDYLCRYV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgtcaccgtccccagttcggcctcgcagactccgttcggcgctggtgcccgc
ctctccgcccgccgattgccggctccccggcggcccttcctctgcctcgccttcagagcg
gattggactgccaagtgctcggccgcggccataccatctgaggccgtaaagccgcctcag
aagtcatcaaagcgagctcaggctgcctccgtcgacgccccccccaccgccacccaggac
ttggactacaacgaggtcgccgccgcgctcgagaacatctataagctcagcccggcggag
gtctccgatgtggaggaggctgatcggcgcggaaggaggcgccgtggccggtcgaggaaa
agggcgaaagagggggacggggaagagggcaatgtggtgaggaataggaagaggagggtg
aggagattgagtttggagaagaggatagcttcgaggaggaggaaggatgaggaggtggag
gcagcggccgcgcgggatgaaaggagggatcttgatgaggatggggagaagctgttgagg
gaatactcggtatcgacagatttggcgagcttggattggaaaaagatgaagattccgccc
gttcttagttctgccgagcataatcggctgttcgagttgatgcagcccatgaaagcaatc
tttgaggtgaaaaagaacttggacaaggatctaaatagagagcctacggatgctgagctg
gccgttgcagtcaatatgactgtgcctcgattaagaagacatatcgaagttggtcaagct
gcaaggaacatgctaatcaagcacaatcttcggctagttttatttgtaatcaacaagtat
tatccagagattgcaagtggtcagaagttccaagacctctgccaagctggagtgaagggt
ctcattactgccattgatcgatttgaaccaaagcgtggtttccgtttatccacatatggt
ctattttggatccggcattctataacacgttcgatgactgtttcaagctttacacgagtt
ccctttgggattgaatcggtcagacaagagatccagaaagccaaattagagttgcagttc
gagcttgggagattgccaaaagatgaagagatcattgacagagtaaaaatttcaccggag
agatatcatgatgtcatgaaggctgcaaaaccaatcttttcccttcatgcaaggcatgct
gtaacacaagaagaatttatcgatgggatcactgatatggatggtgtgggtggtgataag
catagacaacgtgcacttctacgacttgctctagatgatgtgctagattcactgaagcca
aaggagagcttggtgattagacagagatatgggcttgatggcaagggtgataggacactg
ggagagattgctggaaacctcaatatttcaagggagatggtccgaaagcatgaattgaag
gcatttatgaagctcaaacatccagcccgagttgactatctttgcagatatgtctga
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