Phoenix dactylifera (date palm): 103722248
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Entry
103722248 CDS
T03274
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103722248
Membrane trafficking [BR:
pda04131
]
Protein recycling
Others
EARP complex
103722248
Endosome - Golgi transport
Tethering complex
GARP complex
103722248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
103722248
NCBI-ProteinID:
XP_008810948
UniProt:
A0A8B7D114
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Position
18:3801019..3825368
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AA seq
711 aa
AA seq
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MGDSNVEIQDNQKQGFDLGVFVGDLAFDEDASSDEISLEGLQQELEECKNDDEVANILAK
GTKLREYTKGVENNVRLVELDSIQDYIKESDNLVLLHDQIHDCDNILSQMETLLGGFQAE
IGSISSEIKSLQEKSMDMGLKLKNRKAAESKLSRFVEDIIVPPRMVDIIVDGEVNDEYLR
TLEILSKKLKFVEVDSMVKASKALKDVQPELERLRQKAVSKAFEFMIQKLYALRKPKTNI
QILQQSVLLKYKYVVLFLKEHGKEIYAEVRAAYVDTMNKVLSAQFRAYIQALEKLQLDIA
TSTDLIGVETRSTGHFLRGREPIKNRSAVFALGERINILKEIDQPALIPHIAEANSQKYP
YEVLFRSLHKLLMDTATSEYLFCDDFFGEDSIFYEIFTGPFAVIDEHFNAVLPNCYDAIG
LMLMIRIIHQHQLIMFRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRSANVKTLWED
DVHPHYVMRRYAEFTASLVHLNVEYGDGQLDLNLERLRMAVDDLLVKLAKLFTKPKSQTV
FLINNYDMTIAILKEAATEGGKTQLHFEELLKSNIAIYVEELLAEHFSDLIKFVKTRASE
ETSSNSEGPTISDVEPMVKDFASRWKAAIELMHKDVITSFSNFLCGMEILKAALTQLLLY
YTRLSECVKRISGGSALNKDLVSISSILYEIKNTRGPFSSSVLFNLVETQE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattctaatgttgagattcaagataatcaaaaacaaggatttgacctgggagtt
tttgttggggatctggcttttgatgaggatgccagcagtgatgagatatcattggaggga
ctacaacaagaactcgaagaatgtaagaatgatgatgaagtggcaaatatactagctaaa
ggcacaaaactacgagaatacacgaagggtgttgaaaacaatgtacgcctagttgaattg
gactcaatacaggattacatcaaagagagtgataatttagttttactacatgatcaaatt
catgattgcgacaacattttatcacaaatggaaactcttctcggtggttttcaggcagag
attggttctataagctcagagataaagagtcttcaggagaaatccatggacatgggtcta
aagctaaaaaatcgtaaggcagcagagtctaaactgtcaagatttgtggaagacattatc
gtgcccccaaggatggttgacataattgttgatggagaggtgaatgatgaatatttgaga
acccttgagatactgagcaaaaagttgaaatttgttgaagttgattctatggtcaaagca
tcgaaagctctaaaagatgttcagcctgaactggaaagactgagacagaaggcagtctca
aaggcatttgagttcatgattcagaagctttatgctttgagaaagccaaaaacaaatatt
cagatactgcaacagagtgttctcttaaaatataagtatgtggttctttttcttaaagag
catggtaaggagatatatgctgaggttcgtgcggcatatgttgatacaatgaacaaggtg
ttgagtgcacaattccgtgcatatatacaagcattggaaaaactgcaactggatatagcg
acatcgactgatttaattggagttgagactagaagcactggccattttctaagaggaaga
gaacctataaagaatcgttctgctgtttttgctttaggtgaaagaataaatattttaaag
gaaattgatcaacctgcattgattccacatatagctgaagctaactctcagaagtatccc
tatgaagttctcttcaggagcttgcacaaacttctgatggatactgctacttcagagtac
cttttttgtgatgatttctttggagaagattctatattttatgaaatatttacaggacct
tttgcggttatagatgaacatttcaatgcagtactcccaaattgttacgatgcgataggc
ttaatgcttatgatccggataatacaccaacaccagttgattatgttcaggcgaaggatt
ccatgcttggattcatacttggacaaggttaatatttctttgtggcctcgtttcaagatg
gtatttgacatgcatctcaacagtttgcgtagtgccaatgtgaagacgttatgggaggat
gatgttcatccccactatgtaatgaggcgctatgctgagttcacagcctcacttgttcac
ctcaatgttgaatatggagatggtcagcttgatttgaatctggaacgattgcgaatggca
gttgatgacttgcttgttaagttggccaaactattcacgaagccaaagtctcaaactgtg
tttctcataaacaattatgatatgacaattgccatactaaaggaggctgctacagaaggt
ggaaaaacacaattgcactttgaggaactgctaaagagcaatatagctatatatgtggaa
gaattgcttgcggagcattttagtgatctcatcaaatttgtcaagacacgtgcttctgag
gagacgagtagtaactcagaggggcccaccattagtgatgttgaaccgatggtcaaggat
tttgcaagcagatggaaggctgcaatagagctgatgcacaaagatgtgatcacttctttc
agcaattttttgtgcgggatggagatcctcaaggctgcattgacacagcttctgctatac
tatactaggctctctgaatgtgtcaagagaatttctggtggctctgctctgaacaaggac
ttggtttccatatcctcgatattatatgaaatcaaaaatactcgaggaccttttagttct
tcagtccttttcaacctagtggaaacccaggaatga
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