Phoenix dactylifera (date palm): 103722340
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Entry
103722340 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103722340
04121 Ubiquitin system [BR:
pda04121
]
103722340
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103722340
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103722340
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103722340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-RING_16
zf-Nse
zf-RING_10
Prok-RING_1
zf-HC5HC2H
Zn_ribbon_8
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
103722340
NCBI-ProteinID:
XP_008811090
UniProt:
A0A8B8ZIS2
LinkDB
All DBs
Position
18:complement(3745573..3752688)
Genome browser
AA seq
362 aa
AA seq
DB search
MSSAGAPGAAAPLQRYFCHQCDRTVTLTVSPGAEIACPICHGGFVEELDFPDSNPNPSSR
PFSTFQSSDPFFFSPSAFPFLFPPTSPSASFDLRNPSDLVGLFGPDSFPSAAPGSGPGGG
PEPFNPLVFLQNHIQQLLSGGANIQVVLEGGPGLGGSLGDYFIGPGLEQLIQQLAENDPN
RYGTPPAAKSAISSLPDIKITEELLASDEAQCAVCKDTFEIGVEAKQMPCKHIYHKDCIL
PWLELHNSCPVCRYELLTDDPDYENKRGAAAEGARPAGAGDPGGAGGSAAGASGDGNTLS
PRTVERRFRISLPWPLRGFGSQAEASNTGGGGGNDGGSSGGTAANSSGGGNTGSETRQDD
LD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgccggagccccgggcgccgccgcccccctgcagcggtacttctgccaccag
tgcgaccggacggtcacccttaccgtctcccccggcgccgagatcgcttgtcccatctgc
catgggggcttcgtcgaggagctcgacttcccggactccaaccctaaccctagctctcgt
cccttctccaccttccaatcctccgaccccttcttcttttccccctccgccttccccttc
cttttcccccccacctccccctccgccagcttcgacctccgcaaccccagcgacctcgtc
ggcctcttcggccccgactccttcccttccgctgcccccggcagcggcccaggcggcggc
ccggagcccttcaatccgttggtcttcctccagaaccacatccagcaactcctttccggc
ggcgctaatatccaggtcgtcctcgagggcggccccggcctcggtggcagccttggagac
tacttcatcggccccggcctcgagcagcttatccagcagcttgccgagaacgaccccaat
cgctacggcaccccgccggcggccaagtccgccatctcctccctgccggacatcaaaatc
accgaggaactcctcgcctccgacgaggcccagtgcgcggtgtgcaaggatacgttcgag
atcggcgtggaggcgaagcagatgccgtgcaagcacatctatcacaaggactgcatcctg
ccgtggcttgagcttcacaactcttgccccgtgtgccggtacgagctgctgacggacgat
ccggactatgagaacaagagaggggctgcggctgagggggcaaggccggcaggggctggg
gatcctggtggcgccggtgggtcggcggctggggcatcgggggatggaaacactctgagt
ccgaggacggttgagaggaggtttaggatctcgctgccttggccactgaggggttttggg
tcgcaagctgaggctagcaatactgggggtggtggtgggaacgacggtggtagctctggt
ggaactgctgcaaattcttctggcggtgggaacactgggtcggagacccggcaagatgat
ttggattga
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integrated database retrieval system
