Phoenix dactylifera (date palm): 103722388
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Entry
103722388 CDS
T03274
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103722388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103722388
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103722388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Zn_ribbon_LapB
DUF1258
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103722388
NCBI-ProteinID:
XP_038972772
UniProt:
A0A8B8ZHK8
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSFDLVLKPSCEGCGSTSDLYGSNCKHTTLCRSCGKTMAENRGRCRMCGAFITKLIREYN
VRASANTDKAFYIGRFVTGLPPFSKKKNAENKWSLYKEGLQGRQLTDSLREKYKNKPWVL
EDETGQHQFQGQLEGSQSTTATYYLLMLHGKEFIAIPAGSWYNFSKIAQYKQLTLEEAEE
KMNKRKHNATGYERWMMKAATNGAAAFGEMIKKSEDTSSGGVEANRVKKGKSNDDGDHSD
KGEEDEEEEEARKTRLGLSKKSVDDDEGGGRGDDVDLDDDDIEKGDDWEHEENFTDDDEA
VGNDPEEREDLAPEIPAPPEIKQDDEDENEEDGGLSKSGKELKKLLGRAAGLNESDADDD
DEDDDDDEVGMSPVLAPKQKDTPKDEPTDSSPSKPVPPSGSARSTPAASKSSKTKRKFGS
EEVKSSNGAPAKKVKMDNDSKSSGVKDEPPTSSKTSMPGKASSSTSARTGPTSSVAPVTE
EEIRTVLLSVAPVTTQDLVARFKARLKSQEDKSAFADILRRISKIQKTNGHNYVVLREK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgatctggtgctcaagccgtcgtgcgaggggtgcgggtcgacctcggacctc
tacgggagcaactgcaagcacaccaccctctgccgctcctgcggcaagaccatggccgag
aaccgcggccgctgccgcatgtgcggcgccttcatcaccaaattgatcagggagtataat
gtccgagctagcgccaatacagacaaagctttctatattggtagatttgtcactggtttg
cctcctttttcaaagaagaagaatgccgagaataaatggtctctttacaaggaagggctt
caaggacggcagctcactgacagtttgcgggagaagtacaagaacaaaccatgggttttg
gaggatgagactggtcagcatcagtttcaaggtcagcttgagggttcacaatctacaact
gcaacttactatctgttaatgttgcatggcaaggagttcattgctattcctgctggttct
tggtacaactttagcaaaattgcacagtacaagcaattaacactagaagaagctgaggag
aagatgaacaaaaggaagcataatgcaactggatatgaaagatggatgatgaaggcagca
actaatggagctgctgcttttggtgaaatgataaagaagagtgaggacacgagcagtggt
ggggttgaagccaatcgtgttaagaaaggaaaaagcaatgatgatggagatcactctgat
aagggtgaggaagatgaggaagaagaggaggcaaggaagactaggcttggactttccaaa
aaaagtgttgatgatgatgaaggtggtggaagaggggatgacgttgatttggatgatgat
gacattgaaaaaggtgatgactgggagcatgaagaaaatttcactgacgatgatgaggct
gtgggcaatgatccagaggaacgggaagatttggctcctgaaattcctgctccaccagaa
attaagcaggatgatgaggatgaaaatgaagaagatggtggattgagtaagtctggaaag
gagttgaagaaactgcttggacgagctgctggactaaatgaatcagatgctgatgatgat
gatgaagatgatgatgatgatgaggttggcatgtcacctgtgcttgctccaaaacaaaag
gatacacctaaagatgaacctacagatagcagtccctcaaaaccagtacctccttcagga
tctgcccggagcacaccagctgcatccaaatcatcaaagacaaagaggaaattcggaagt
gaggaggtgaaatcttctaatggtgcccctgcaaagaaggtcaagatggataatgactca
aaatcatcaggtgttaaggatgagcctcccacttcctccaaaactagcatgcctgggaaa
gcatccagttccacatctgctagaactggaccaacatcttctgtggctccggttacggag
gaggaaattaggactgttcttctttcagtggctccggtgactacacaggacctggttgct
agattcaaggctagactaaaatcccaggaggataagtcagcttttgcagatattttaaga
agaatatcaaaaatacagaagaccaatggccacaactatgttgtgttgagagagaaatga
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integrated database retrieval system
