Phoenix dactylifera (date palm): 103722450
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Entry
103722450 CDS
T03274
Name
(RefSeq) flowering time control protein FY-like isoform X3
KO
K15542
polyadenylation factor subunit 2
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103722450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103722450
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103722450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_Vps41
WD40_like
Pep3_Vps18
WD_LRWD1
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
VPS8_N
Motif
Other DBs
NCBI-GeneID:
103722450
NCBI-ProteinID:
XP_008811236
UniProt:
A0A8B7D1E1
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MWQQDVGDITVLQPTPAAVLDMLPTVAYADNPSTSFAAKFVHASTNKNRCSINRVLWTPT
GRRLITGSQSGEFTLWNGQSFNFEMILQAHEQAIRSMVWSHNENWMVTGDDGGSIKYWQN
NMNNVKVNKSAHKESVRDLSFSKTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKS
VDWHPTKSLVVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQI
IKLYDIRSMKEVASFRGHCKDVTALAWHPSHEEYFVSGSFDGSIFHWLVGHETTQIEIPG
AHDNSVWDLAWHPMGYLLCSGGNDHTTKFWCRNRPADTSRDKCSIGHQGYGDQNSLLAGR
IASGFPVPEPPPTPGSFAAGLSRTEGTIPGIGVAMPLSVPSLDGSDQEQRQPIPGILPSG
APPLGPHPSLLASGQQQAFQQIPQQVPPQQQQHMTFSQQMVSLPLPPNLAQLQPPSHLPL
LQHPHGPHPSHLQLPPLGISPFIPSSVPGSMSMPSSMAPSIPPPLPNPMVVQGSGNQMIS
PMPQAQMMGLTQMHSGPVTTSNIPPIGGFANGITNIQGATNAGGLQNLPLGAMFNRPQGG
QIGAVRGLNAYQPGMMDVRLHGMALGGNMGLPPPPPPPLPHGSAPQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagcaggatgttggggacataactgtgttgcaacctactccagctgcggtccta
gatatgttaccaacagttgcatatgctgataatccatcaacaagctttgctgcaaaattt
gttcacgcctctacaaacaaaaatagatgttcaattaatcgggtattgtggacccctaca
gggcggcgtcttataactgggtcacaaagtggcgaatttactctttggaatggacaatct
tttaattttgaaatgattcttcaggctcatgaacaagctattaggtccatggtttggagt
cacaatgagaattggatggtcactggtgatgatgggggttcaatcaagtattggcaaaat
aacatgaacaacgtaaaggtaaataaatctgctcataaagaatcagtccgagacttaagt
ttttctaaaacagatttgaagttctgttcctgctccgatgacactactgtcaaagtctgg
gattttgcacggtgccaagaggaaagatccttaactggccatggttgggatgtcaagagt
gttgattggcacccaacaaaatcattagtggtttcaggtggcaaagacaatcttgtgaaa
ctatgggatgcaaaaacaggaagagagctctgttcatttcatggtcacaaaaacactgta
ctttgtgtcaaatggaatcaaaatggtaattgggtgctgactgcttctaaggatcagata
attaagctttatgatattagatccatgaaagaggttgcatcatttcgtggacattgcaaa
gatgtgactgctctggcttggcacccatctcacgaagaatactttgtcagtgggagtttt
gatgggtccatctttcattggcttgttgggcatgagacgactcagattgaaatacctggt
gcacatgataacagtgtttgggatctagcttggcatcccatgggctatttactttgcagt
ggtggcaatgatcacacgacaaagttttggtgcagaaacaggcctgcagatactagccgt
gataaatgcagtattggtcatcaaggttatggtgatcaaaactctctccttgctggtcgt
atagcaagtggtttcccagtgccagagcctccgccaactccaggatcatttgctgctgga
ttgtcacgaactgaaggaactattcctggtattggagttgcaatgccactatctgttcca
tctcttgatgggtcagatcaagaacagaggcagcctattccaggtattcttcctagtggt
gcacctcctctaggtccccatccatctcttttggcatccggacagcagcaagcatttcag
caaattccccagcaagtcccacctcaacagcagcaacatatgacattttcacagcaaatg
gtttcactgccacttcctccaaatctggctcagctacaacctccatcacatttgccgctt
cttcagcatcctcatggacctcacccttcacatctgcagctgccacctcttggaatttcc
ccatttattccctcttcggtgccaggctccatgtccatgccttcatcaatggctccatcc
attcccccgcctttgcctaatccaatggtggtgcaaggttcaggaaatcagatgatctct
ccaatgccacaagcacaaatgatgggccttactcagatgcactcagggcctgttaccacc
agcaatatccctcccatagggggttttgcaaatgggatcacaaatattcagggtgcaacg
aatgcaggtggactgcaaaatcttccacttggtgctatgtttaaccggccacaaggtggg
caaataggggcagttcggggactaaatgcttatcagcctggaatgatggatgttcggctc
catggcatggctctaggaggcaatatggggcttccgccgccaccgccgccgccactgcct
catggttctgcgccccaatag
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