KEGG   Phoenix dactylifera (date palm): 103722596
Entry
103722596         CDS       T03274                                 
Name
(RefSeq) pre-mRNA-processing factor 17-like isoform X1
  KO
K12816  pre-mRNA-processing factor 17
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103722596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103722596
Spliceosome [BR:pda03041]
 Complex C
  Other components
   Step II factors
    103722596
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_WDR75_2nd DExH14_plug
Other DBs
NCBI-GeneID: 103722596
NCBI-ProteinID: XP_008811427
UniProt: A0A8B7D210
LinkDB
Position
18:5158941..5166166
AA seq 603 aa
MDLLQSYGDKSDEEDGEESRRKGGEEKGKGGGETEVEAAPASPDSDSSSSPPRLLPAKSA
APRVDDTALALAAAGTARFLHRPIDPAQHAVAFNPTYDQLWAPIHGPAHPFAKDGVPQGM
RNHKLGFVEDASIEPFLFDEQYNTFHKYGYAADPSGIDYVGDLDTLQRNQALSVYNIPQQ
EQKRRRLQMKATPAEEDPAAAAGPDVENPASEEWILKNRNSPWAGKKEGVQGELTEEQKK
YAEEHAAKKAEKERGGEGRGDRVEQVDKSTFHGKEERDYQGRSWIAPPKDAKAANDHCYI
PKRWVHTWSGHTKGVAAIRFFPKHGRHLLSAGMDSKVKIWDVFNTGKCMRTYMGHSKAVR
DICFSNDGTKFLSAGYDKNIKYWDTETGKVISTFSTGKIPYVVKLNPDEDKQNILLAGMS
DKKIVQWDMNSGEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI
SEPHMHSMPSIALHPNSNWLAAQSLDNQILIYGTKERFQLNKKKRFAGHIVAGYACQVNF
SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCVWHPLEQSKVATCGWDGMIK
YWD
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggatcttctccaaagctacggggacaagagcgacgaagaagacggggaagaatcgcga
cgaaaaggaggagaagagaaggggaaaggaggaggggagacggaggtggaggcggcccct
gcctcgccggactcggactcctcgtcctctcctccccgtctcctcccggccaagtccgcc
gcgccgcgggtggacgacaccgccctcgccctcgccgccgccggcactgctcgctttctc
caccgccccatcgacccggcccagcacgccgtggccttcaaccccacctatgaccagctc
tgggcccccatccacggtcccgcccaccccttcgctaaggacggcgtcccccagggcatg
cgtaaccacaagctcggcttcgtcgaggacgcctccatcgagcccttcctcttcgacgag
cagtacaacaccttccacaagtacggctacgccgccgacccctccggcatcgactatgtc
ggcgacctcgacaccctccaacgcaaccaggccctctccgtctacaacatcccccagcag
gaacagaagcgccgccgcctccagatgaaggccacccctgccgaggaagaccccgccgcc
gccgccggtcccgacgtcgagaaccccgcctctgaggagtggatactcaagaaccgcaat
agcccgtgggcagggaagaaggagggggtccagggtgagcttaccgaggagcagaagaag
tacgccgaggagcatgctgcgaagaaggccgagaaggagagaggcggcgaggggagaggg
gacagggtcgagcaagtcgacaagagcaccttccatgggaaggaggaacgcgactaccag
ggccggtcgtggattgcacctcccaaggatgccaaggccgccaatgaccactgctacatc
cccaagcggtgggtccacacgtggagcggccacaccaagggcgtcgccgccattcgattc
ttccccaagcatggccgccacctcctctcggcgggcatggactcaaaggtcaagatttgg
gatgtcttcaatacgggcaagtgcatgcgcacctatatgggccactccaaggcggtccgg
gatatctgcttctccaacgatggtaccaaattcttgagcgccgggtacgacaagaacatc
aagtattgggacaccgagaccgggaaggtgatctcaaccttctccactgggaaaatcccc
tatgtcgtgaagctgaaccccgatgaagacaagcaaaacattcttcttgcagggatgagt
gataagaagatcgttcagtgggacatgaattctggggagatcacacaagagtatgatcaa
catcttggggccgtgaataccatcacatttgtggataataaccggagatttgttacttcg
agtgatgacaagtcccttcgcgtatgggagtttggaattccagtggttataaagtatata
agtgagccacacatgcattccatgccatcaattgctcttcatcccaattcaaattggctg
gcagcacagagcttggataatcagatacttatatatggcaccaaagaaaggtttcagctg
aataaaaagaagagatttgcggggcacattgttgcaggttatgcttgtcaggtgaatttt
tccccagatggacggtttgttatgtcaggggatggggaggggaagtgctggttttgggat
tggaagagttgcaaagttttcaggactctaaaatgccacgagggagtgtgtatcgggtgt
gtgtggcatccattggagcagagcaaggtagcaacttgtggatgggatggcatgatcaaa
tactgggattag

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