Entry |
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Name |
(RefSeq) tRNA pseudouridine synthase A-like
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KO |
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Organism |
pda Phoenix dactylifera (date palm)
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Brite |
KEGG Orthology (KO) [BR:pda00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:pda03016]
103723796
Enzymes [BR:pda01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103723796
Transfer RNA biogenesis [BR:pda03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103723796
Prokaryotic type
103723796
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
5:14150309..14152316
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AA seq |
567 aa
MSSSSATASDADEGPAAAAAADPAAAPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIE
GDLEEALFLAGAVPDADRGLPRRYDWARAARTDKGVSAAAQVVSGRFYVDPPGLVARLNS
HLPDQIRIFGFKRVTNSFNAKKFCDRRRYVYLLPVFALDPSAHPDREAVMASLGSGNELD
RCLECSERGRKVPGLMGREPRTSGGEERNDLGSGGVGGEDDSASNLKSETRVSAGFISEG
SNKAGNGEFESNKVEKSELGSSTVGGEHGGASSLNVEGENDEAKNGEIESGKDVGSAANS
ILDSVVDSGVSKVEECSKLGNVDFVVEAKPIVETVVSMQEKRVETGVDDNTNGEQMAGRK
SGFSYGDEERERFNRISKHYVGTHNFHNFTTRTKAEDPSARRYIISFNADRIVSIEGIEF
VRCEVVGQSFMLHQIRKMIGLAVALMRNCAPESLMDIALRKEVNINVPTAPEVGLYLDEG
LFTSYNQKWKDSHEELSMEAYAEEAEEFKMKYIYSHIASMEHKEGAVALWLHSLNRRNYP
DFHFLETNKEHVDAEQTQVTQAENLRE |
NT seq |
1704 nt +upstreamnt +downstreamnt
atgtcctcctcctccgccaccgcctccgacgccgatgaaggccccgccgccgccgccgcc
gccgaccccgccgccgcgccccgtcggcgctacaaacgccgaaaggttgccattttcctt
ggctactgcggcgccggctaccagggcatgcagaagaaccccggcgcccgcaccatcgag
ggcgacctcgaggaggccctcttcctcgctggcgccgtccccgacgccgaccgcggcctt
ccccgccgctacgactgggcccgcgccgcccgcaccgacaagggcgtctctgccgctgcc
caggttgtctccggccgcttctacgtcgaccccccgggtcttgtcgcccggctcaactcc
caccttcccgaccaaatccggatctttggattcaagcgcgtcaccaactccttcaacgcc
aagaagttctgcgatcgccgccggtacgtctacctcctccctgtcttcgccctcgacccc
agcgcccaccccgatcgggaggccgtgatggcgagcttggggtccgggaacgagctcgac
cgatgcctcgaatgctccgaacgcggccggaaggtccccggtctcatgggtcgagagccg
aggacttcgggtggtgaagaaaggaatgatcttggcagtggtggagtgggtggggaggac
gacagtgcctccaatctgaaatcggaaactagggtttcggctggttttattagtgaaggt
agcaacaaagctggaaatggcgagtttgaatcaaataaggtcgaaaaatccgagcttggc
agcagtacagtgggtggagagcatggtggcgcttctagtttgaacgttgaaggtgagaat
gatgaagcgaaaaatggcgaaattgaatctgggaaagatgttggatctgctgctaattca
attctagattctgtagtcgattctggggtttctaaagtggaagaatgcagtaaattaggg
aatgtggattttgtagttgaagcgaaacccattgtggagacagttgtttcaatgcaagaa
aagagagtggaaactggagttgatgataatactaatggagagcaaatggctgggagaaaa
agtgggttctcttatggggatgaggagagggagagatttaacagaatatcaaagcattat
gtgggaactcacaacttccataacttcacaacaagaactaaggccgaagacccctctgct
cggaggtatatcatttccttcaatgctgatcgtattgttagtattgaggggattgagttt
gtcaggtgtgaggtcgttggccagagcttcatgcttcatcagatacgcaagatgattggc
cttgctgtcgcattgatgaggaactgtgcaccagagtcattgatggatatagctttaaga
aaggaagtaaacattaacgtgccaactgcgcctgaggttggattgtacctggatgaaggc
cttttcacttcttataaccagaaatggaaggattcgcatgaggagttgtccatggaagct
tatgccgaagaggctgaggagtttaagatgaagtatatatactctcacatagcatctatg
gagcacaaagaaggagctgtagcattgtggcttcactccttgaaccgccgtaattaccct
gatttccattttctggagacaaataaggagcatgttgatgcagaacaaactcaagttact
caagcagaaaacttgagagagtga |