Phoenix dactylifera (date palm): 103723856
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Entry
103723856 CDS
T03274
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103723856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103723856
03110 Chaperones and folding catalysts [BR:
pda03110
]
103723856
03029 Mitochondrial biogenesis [BR:
pda03029
]
103723856
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103723856
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103723856
Messenger RNA biogenesis [BR:
pda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103723856
Chaperones and folding catalysts [BR:
pda03110
]
Heat shock proteins
HSP60 / Chaperonin
103723856
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103723856
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103723856
Exosomal proteins of other body fluids (saliva and urine)
103723856
Exosomal proteins of breast cancer cells
103723856
Exosomal proteins of colorectal cancer cells
103723856
Exosomal proteins of bladder cancer cells
103723856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
FtsK_gamma
Motif
Other DBs
NCBI-GeneID:
103723856
NCBI-ProteinID:
XP_008813151
UniProt:
A0A8B7D597
LinkDB
All DBs
Position
17:1636769..1643860
Genome browser
AA seq
608 aa
AA seq
DB search
MSSSFSTMSFAAPIGLATDSKLSASAKRFSQFSSLAFISSTSVSGRRQNVCPRKRCNLKI
NAMAKELYFNKDGSATKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQIT
RGIEKTAKSLVSELRKISKEVEDIELADVAAVSAGNNYEIGNMVADALSKVGRKGVVTLE
EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMSAEYENCKVLLVDKKITNARDLIYVLE
DAIKGGYPILLIAEDIEQEALATLVVNKLRGSLKIAAIKAPGFGERKSQYLDDIAILTGG
TVIRDEVGLTLDKADKEVLGTAAKVVLTKDSTTIVGDGSTQGAVNKRVAQIRNLIEAAEQ
EYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCS
LLRLASKVDAIKETLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVIEKVLASDNLK
IGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPEPVPAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatctttcagcactatgtcttttgctgctccaattggccttgcaacggacagc
aagctttcagcttctgctaaaaggttttcccaattttcttcgcttgcttttatatcatct
acttccgtcagtggcaggagacagaatgtgtgtccaaggaaaagatgtaacttaaagatt
aatgcaatggccaaggagttgtacttcaacaaggatggatcagctactaaaaagctgcaa
actggtgttaacaagcttgcagaccttgttggtgttactcttggtccaaaaggcagaaat
gttgttctggagagcaaatatggatctcctagaattgttaatgatggggttacagtggcc
aaagaggttgagctagaggatcctgttgagaatattggtgcaaagctggtaagacaagct
gctgcaaagacgaatgacttggctggggatggaacaactacttcggttgtccttgctcaa
ggtttgattgctgaaggtgttaaggtggttgcagcaggagccaacccagttcagattact
cgtggcattgagaaaactgctaaatccctagtgtctgaactcaggaaaatatctaaggag
gttgaagacattgaacttgcagatgtagctgctgttagtgctggaaacaactatgaaata
ggaaacatggtagctgatgctctgagcaaggtgggtaggaagggggtggttacacttgaa
gaaggaaaaagtgcagaaaacagcctttatgtggtagagggaatgcaatttgatcgtggt
tatatttccccctactttgtaacagacagtgaaaaaatgtcagctgaatatgaaaattgc
aaggtgcttcttgtggacaaaaaaattacaaatgcaagagatctgatctatgttttggag
gatgccataaaagggggttatccgatattattaattgcagaagacattgaacaggaagcc
ctcgcaactcttgtcgtgaacaagcttagagggtcattgaaaattgctgcaattaaagcc
ccggggtttggagagcgcaaaagtcaataccttgacgacattgcgatactgactggaggt
accgtaataagagatgaagttgggcttaccttggataaagcggacaaagaggtcttgggt
actgctgcaaaggttgtactaaccaaagactcaaccaccatagttggtgatgggagcaca
cagggggcagtaaataaaagagttgcacagatccggaatcttattgaggctgctgaacaa
gaatatgaaaaggaaaagcttaatgagaggatagcaaaactctctggtggtgttgctgtc
attcaggttggagcgcaaacagaaacagaactgaaagagaagaaattgagagttgaagat
gctctcaatgctaccaaggcggctgttgaggaaggtattgttgttggtggtggctgtagt
cttttgaggctcgcatccaaggttgatgccatcaaggagactcttgagaatgatgagcaa
aaggttggggcagagatagtgaggagggctttgagctacccactgaaattgattgctaaa
aatgctggtgtcaatggaagtgtggtcattgagaaggtgcttgctagtgataaccttaaa
attggttataatgccgcaactggaaactacgaggatttgatggctgcggggattattgac
ccaactaaggttgtgaggtgctgtttggagcatgcagcttcagtcgccaagaccttcctc
acctctgatgttgtggttgttgacatcaaggagcctgagcctgttcctgcaggaaaccca
atggacaattcaggatatggatactga
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