Phoenix dactylifera (date palm): 103723968
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Entry
103723968 CDS
T03274
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103723968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103723968
Enzymes [BR:
pda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
103723968
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103723968
Prokaryotic type
103723968
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
103723968
NCBI-ProteinID:
XP_008813296
UniProt:
A0A8B7D5H1
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All DBs
Position
18:complement(3407089..3412096)
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AA seq
325 aa
AA seq
DB search
MASSSKTLVEIFQPAKRLKSLPTSPETLTPKSSISALCKPSPTDAAGTTGDILPPESPST
LTPDQKKRIEINKALARSKRNLRLCTEKIDRARAEGMDYVKLEELLVEETWLEALPGELL
KPYAKNLCRFLEREVRGSVPIYPPPYLVFNALHSTPFDRVKAVIIGQDPYHGPGQAMGLS
FSVPEGIKMPSSLVNIFKELQKDVGCSVPSHGNLERWAVQGVLLLNTVLTVRNHQANSHA
KKGWEPFTDAVIRTISQKKSGVVFLLWGNSAQEKSRLIDESKHHILRAAHPSGLSANRGF
FGCRHFSQTNQILERSGLSPIDWQL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcctccaaaaccctagtcgaaattttccagcccgcgaagcgcctcaaatcg
ctccccacctcccccgaaaccctgacccccaaatcctccatctccgccctctgcaagccc
tctcccaccgacgccgccggcaccaccggcgacatcctcccgccggaatccccctccacc
ctcaccccggaccagaagaagaggatcgagatcaacaaagccctggcgaggtcgaagcgg
aacctccggctctgcaccgaaaaaatcgaccgagccagagctgaggggatggactatgtg
aagctggaggagcttttggtggaggagacgtggttggaggcgctcccgggggagcttctg
aagccctacgccaagaatctgtgcaggtttctggagcgggaggttcgtgggagcgtgccg
atatatcctccgccgtatcttgtattcaatgccctccactcgactccctttgatagagtg
aaggcggtgatcattggacaggatccgtaccatggacctggtcaagccatgggtctttct
ttctcagtgccggagggtattaagatgccttctagccttgtcaatatattcaaggagctt
caaaaggatgttgggtgctctgtgccatcacatggaaatctggaaagatgggctgtacag
ggtgttcttctgctcaacactgtcctcactgtgaggaaccatcaagctaattcacatgcc
aagaaagggtgggagccgtttactgatgctgtgattcgaacaatttcacagaagaaatct
ggagttgtttttcttctttggggaaattctgctcaagaaaagtcaagattgattgatgag
tcgaaacatcacattctaagagctgctcatccatcaggcctatcagctaacagaggtttc
tttggatgcaggcatttttctcagacaaatcagattttggagagatcgggtctttctccc
atagattggcaactctag
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