Phoenix dactylifera (date palm): 103723997
Help
Entry
103723997 CDS
T03274
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X6
KO
K08739
DNA mismatch repair protein MLH3
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103723997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103723997
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103723997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103723997
NCBI-ProteinID:
XP_008813335
UniProt:
A0A8B7D5I8
LinkDB
All DBs
Position
17:complement(12224922..12248430)
Genome browser
AA seq
1125 aa
AA seq
DB search
MQSIKRLPRSVHSPLRSSIVLFDLPKVVEELIYNSIDAGATKVYVSINIRACYVKVEDDG
CGITRDGLVMLGEKYVTSKFGLMDDIESISKSLGFRGEALGSLSDISLVEVRTKARGKPN
AYRKILKGPKCLFFGIDDRREVVGTTVIVRELFYNQPVRRRCMQSSPKKVLHSVKKCVLR
TALVHPQILFKVTDIESEDVLLCTIPSSSPLPLISDGFGNEVSSSLHEIVYSDKKLMLSG
YISGSADAFSTKAFQYLYINSRFVSKCPIHKLVNDLAARFQGSLAQRVEPEFHRGKRLKN
HGYPAYMFNLCCPPLSYDLSFEPSKTIIEFKEWGTILIFFEQAIMHCWEQLQAKSLQGKS
FAYKNGISMENEVQKEDPLTTDISKTSNMRKKRCNIQLRHCSVSHSPISSPLKIASEDIT
TSHGRSSKDHKIFSLEPEPSQSDTEFFGFTDCSLQHVINDRADVLDSRCDQMGGINHNPL
WWTRNADSLPLENHLIPDLTSEVKEKCDMQEFVWKNRPPNGTRNLKGELISCNMTDPHDI
LVNAQKVHNPLHNPNPKSLSKPGMKESYPLMENELCNSTPSGFGIKLVHLRKELDSNALD
ANYHVEGSSSRDIFCPKKFDAATPSFNIIRKCQALRDLDVLSSDSVGPHSCDQTCLFEEN
NLHNRLEVCETGSICQLPNEECLLYSRHPTFDSTSRDSLEWNLRSLRCIDAGYSTIMEEK
DEFFNSLRNSYSEIYPDESWAKNRSDHEYCSSPKKDMHYGHLSDETTFGDVCLLDNLNHE
TSWLFSDSINVKRTDGYSKFRVHPVHNHDKGVESSLHEQGFRNHVLPQAHKVRSRRSSSA
PPFYKGKCKFFTLNCLAKTARKKPDFEFSKASPESINSLDNVSQSNASQKPLNREVSQPQ
IRQCIDEKRSRQEMKISYSVGSITDEPEHVAAEMTKWRTGILQPTVKDGDFWHNSFEQSE
DILDISSGILHLAGSSLVPESIDKDCLQDARVLLQLDRKFIPVMASGTLIIIDQHAADER
IRLEELRRKVLSGEGIGITYLDPEQELVLPEMGLQLLQKYREQIQQWGWICSTPSQPSES
FTKNMNLFKRRACGVSLVAVPCILGINLTDKDLIEFIEQPFFQEL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcataaaacgcttgccgagaagtgttcatagtccactgcgttcgagcatagtt
ttgtttgacttgccgaaagtcgtggaagaattgatatataatagtattgatgcaggtgcg
accaaggtttatgtttctataaatatcagagcatgttacgtcaaagtagaagacgatggt
tgtggtattacaagagatggactggtcatgttgggtgaaaaatatgtgacgtccaagttt
ggcctcatggatgacattgaatctatttctaaaagcctgggttttagaggagaggcattg
ggttccctttctgatatttccttagtggaagttagaacaaaagctcgcgggaaacctaat
gcgtaccgcaagattttaaagggaccgaagtgcttattttttggaatagatgatcggagg
gaagttgttggtacgactgttattgttcgagaattattttacaaccaaccagttcgaagg
agatgcatgcagtctagccccaaaaaggttctccattctgtgaagaaatgtgtgcttcga
actgctcttgttcacccgcaaattttattcaaagtcactgatattgagagtgaggatgtg
ttactctgcacaattccttcgtcatctcctttgcctcttatctctgatggttttgggaat
gaagtatccagttctctacatgaaattgtttactctgataaaaaactgatgctttctggg
tatatatctgggtctgctgatgctttctccacaaaggctttccagtatctctatattaac
tcaaggttcgttagcaagtgcccaattcataaattggttaatgatctggcagctagattt
cagggttctttagcccagagggtcgagcctgagttccatagggggaagagactcaagaat
catggatatccagcatatatgtttaatctgtgctgtcctcctcttagttatgacctaagt
tttgaaccttcaaagacaattatagaattcaaggaatggggtactatcttgattttcttt
gagcaagccatcatgcattgctgggaacaacttcaggcgaaatcactgcaaggaaaatct
tttgcctataaaaatggtatatctatggaaaatgaagttcagaaggaagacccattgacc
acagacatatctaagacctctaacatgagaaagaagagatgcaatatccagttacgtcat
tgctctgtttctcatagccccattagcagtcccctcaagattgcatcagaagatattact
acttctcatggaagatcatctaaagatcacaagatattttccctggagcctgaaccaagc
caaagtgatactgagttttttggttttactgattgctctttgcagcatgtaattaatgac
agagcggatgttcttgattctagatgtgatcaaatgggtggcataaaccacaatcctctt
tggtggacaaggaatgctgattctttgcctctggaaaatcatctcattcctgatcttact
tctgaagttaaagaaaaatgtgatatgcaagagtttgtatggaagaacagacctcctaat
ggcaccagaaacttgaaaggagaattaattagttgcaacatgactgatcctcatgacatc
ttggtaaatgctcagaaagttcataatccattacacaatcccaaccccaagtctctcagc
aaaccagggatgaaagaaagttatcctttaatggagaatgagctctgtaactcaactccc
agtggttttggcattaagcttgttcatttaagaaaagaacttgattcaaatgctttggat
gctaattatcacgttgaaggttcaagttctagggatattttttgccccaaaaaatttgat
gctgctacgccctcattcaatataattagaaaatgccaggcacttagggacttggatgtg
ttatcaagtgattcagttggccctcattcttgtgatcaaacttgtttatttgaggagaac
aaccttcataataggctagaagtttgtgaaactggctccatatgtcagttacctaatgaa
gaatgccttctttattcccgacatccaacttttgattctacaagcagagattcattggaa
tggaatttgagatctttaagatgtattgatgcagggtactctacaataatggaagaaaag
gatgaatttttcaactctcttcggaatagttacagtgagatttatcctgatgaaagctgg
gcgaaaaacagatcagatcatgaatattgctctagtcccaagaaagatatgcactatggc
cacctttcagatgaaacaacttttggtgatgtttgcttgttggataatttaaatcatgaa
actagctggttgttttcagactctattaatgttaaaaggactgatggctattccaaattt
agagttcacccggtgcacaatcatgataagggggttgagagctcattgcatgaacaggga
tttcgaaatcatgtactgcctcaggctcacaaggttagatcaaggaggagttcttcagct
ccaccattttacaaagggaagtgcaaattctttactttaaactgtttggccaaaacagcg
agaaaaaagcctgattttgagttctcaaaggcttcaccagagagcataaactcattagat
aatgtgtcacaatctaatgcatcacagaagcctcttaacagggaggtttcccagccgcag
atcagacaatgcattgatgaaaagcggagcagacaagagatgaaaatatcctactccgta
ggttctatcactgatgaaccagaacatgttgcagctgaaatgactaagtggcgaactggc
attttgcagcctacagttaaagatggggacttctggcataattcttttgaacaaagtgaa
gatatactagacatttcttctggtattttacatctcgctggtagctccttagtgcctgaa
tctattgacaaagattgccttcaggatgcaagggttctccttcagctggatagaaaattt
attcctgtaatggcaagtggaacactcatcattatcgatcagcatgctgcagatgaacga
attcgcttggaagagcttcgccgaaaggtcctgtctggtgagggcattggaattacttat
ctggatcctgagcaggagttagttcttcctgaaatggggcttcagctgttgcaaaaatat
agagagcagatacagcaatggggttggatctgcagcactcctagtcagccctcagaatca
ttcacaaagaacatgaaccttttcaagagacgtgcatgtggtgtttctcttgttgcagta
ccatgtatattaggcatcaatttgactgacaaagatcttatagaattcattgagcagcct
ttttttcaagagctttag
DBGET
integrated database retrieval system
