KEGG   Phoenix dactylifera (date palm): 103724227
Entry
103724227         CDS       T03274                                 
Name
(RefSeq) LEC14B homolog isoform X2
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pda04121]
    103724227
Ubiquitin system [BR:pda04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103724227
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP PEP5_VPS11_N Beta-prop_WDR75_1st PQQ_3 PROPPIN WDR54 PQQ Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Cytochrom_D1
Other DBs
NCBI-GeneID: 103724227
NCBI-ProteinID: XP_017702405
UniProt: A0A8B7MXN1
LinkDB
Position
1:7718945..7727846
AA seq 462 aa
MRGRVYTSGGASSREKLEEETFTIDDDISHLTKISSEPCENVRKAMPNERTKPIPMIKML
SGREFNYSGRGRFSLADCSYLLGRCLPVNLCSNERMDSEAYVSQFSSDGSLFIVGCRRSH
IRIYNVDSGWKVQKDISARSLRWTITDTSLSPDKRFLVYSSLTPIVHIVNVGTPETESRA
NITDIHDGLDFSDHVDSEYSFGIFSVKFSTDGRELVAGSNSDSIHVYDLEANKMTLQFPA
HTTDVNTVTFADETGHLIFSGSDDNLCKVWDRRCFVSTRKPAGILTGHLEGITFIDSRGD
GRYFISNGKDQTTKLWDIRRMSSTPKFSAPKLFSWDYRWDEFPAEARRQKHPSDQSVATY
RGHSVLCTLIRCYFSPAYSTGQKYIYTGSNDGYVYIYDVVTGATVARLKQHDATVRDCSW
HPYFPMLVSSSWDCSFARWEFPGNGADPVLHKKNRRRRSLRP
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgcgtgggagggtgtataccagtggtggagcatcatctagagaaaagcttgaagaagaa
acttttaccattgatgatgacatctctcatctcaccaagattagttcagaaccatgcgag
aacgttcgtaaggccatgcctaatgagcgaacgaaacctattccaatgattaagatgttg
tcaggaagagaatttaattattctggaaggggaaggttttctttagccgattgttcttat
cttcttggtcgatgcctgcccgtcaatctttgtagtaacgaaaggatggatagcgaagca
tatgtgtcgcagttctcctctgatggttcccttttcattgtaggatgtcggagaagccat
atcagaatatacaatgttgatagcgggtggaaagtgcagaaagacatcagtgctcgaagt
ttgcggtggacaattaccgacacatctctttcacctgacaaacgatttcttgtttactcc
agtttgacgccaattgttcatattgtaaatgtgggaactccggaaacagagtcaagggct
aacatcactgatattcatgatggtttggattttagtgaccatgttgacagtgaatattcc
tttgggatattttctgttaaattttcaactgatggtcgagagcttgttgctggaagcaat
agtgattcaatacatgtttatgacctggaagcaaataagatgacattgcaatttccagct
cacacaactgatgtgaacactgtaacctttgctgatgaaactggccatctcatattttct
gggagtgatgataatctttgtaaggtttgggataggcgctgctttgtgtcaacacgaaaa
ccagccgggatcttgacaggtcatctagaaggcattacttttattgatagccgtggggat
ggccgttatttcatttctaatggtaaagatcagactaccaaactctgggacataaggaga
atgtcctccactccgaaattttccgcaccaaaacttttttcttgggattatagatgggat
gaattcccagcagaagccagaagacagaagcatccatctgatcagtcagtagctacatac
agaggtcactcagtcttgtgtactctaatacgctgttacttctcccctgcatatagcacc
ggtcagaaatacatatacacaggatcgaatgatggatatgtttatatctatgatgtggta
actggagctacggttgcaagacttaaacagcatgatgcgaccgttagagactgtagctgg
cacccctacttcccaatgcttgtcagctcatcctgggactgctcctttgctagatgggaa
tttccaggaaatggtgcagatcctgtgttgcataagaaaaacaggaggagacgttcgcta
aggccatag

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