Phoenix dactylifera (date palm): 108510674
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Entry
108510674 CDS
T03274
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108510674
09122 Translation
03015 mRNA surveillance pathway
108510674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
108510674
Spliceosome [BR:
pda03041
]
Complex A
Other components
Complex A specific factors
108510674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108510674
NCBI-ProteinID:
XP_038988334
UniProt:
A0A8B9AY49
LinkDB
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Position
12:complement(5392490..5399765)
Genome browser
AA seq
429 aa
AA seq
DB search
MSGSYRSAPPRGGGGGRGRGGGAGAGGGTGYAGGGYQGGDRGNRGGGGYRGGGRGGSGGR
EGDWLCPDPSCGNLNFARRTECNKCGAPSPNSGGGGGGGGGGGGGGGYNRGGGYYSRGGG
GGGGYRGGDGGYDRNRGGRSINHGRIGGSYSSSQGRDRDDAGYAQILPPALASYGGPMGN
YPSGPNSCGQNNSYGGVPVPPPISYGGSPSYSPSYCAPPPNPYGGDASIGCGVPPVGYDG
GYADRPIPGRDGGAPPCYGGGGHRGAPVEPPLPVKQCDGNCGNSCDNSRIYISNLPPDVT
TEELRELFGGIGQVGRIKQKRGYKDQWPWNIRIYADEFGNSKGDAVLSYEDPSAAHSAGG
FYNDYDMRGYKINVTMAAKTAPRAPPSYGHGGGRGGYSSGGDRRRDNYHDGRGPGPDRYH
HGGQRSRPY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcgtaccgctctgccccgccgcgcggcggcggcggcggacgcggcagaggt
ggcggtgccggtgccggtgggggcactggatacgccggtggtggatatcaaggcggcgac
cgcggaaatcggggaggcggcgggtaccgaggtgggggtcgtggcggcagtggaggccga
gaaggggattggctttgccctgaccctagctgtgggaatctgaactttgcacgacgaacc
gagtgcaataaatgtggtgctccaagtcctaacagtggaggaggaggaggaggaggagga
ggaggaggaggtggtggtggttataatcgaggtggtggatattacagcagaggaggtggt
ggtggtggtggttataggggaggtgacgggggttacgacaggaaccgtggtggtaggagt
attaaccatggtcgcataggtggttcctacagtagtagtcaaggtagagatagagatgac
gctggttatgctcaaattctcccaccagctctggcctcatatggtggccctatgggaaac
tacccatccggtccaaactcgtgtggccagaataactcttatggtggggtgcctgttccg
ccgcccattagctatggtgggtctccttcttattccccttcttattgtgccccacctcca
aatccatatggaggtgatgcctccattggttgtggggttccaccggttggttatgatggc
ggatatgctgatcgtccaatccctggccgtgatggtggtgctcctccatgctatgggggt
ggtgggcatcgtggtgctcctgttgagccccctcttccagttaagcagtgcgacggaaat
tgtgggaattcctgtgacaattcaaggatttacatctcaaatttgcctcctgatgtcact
actgaggagcttagggagctttttggaggaattgggcaggttgggaggatcaaacaaaaa
cgaggctacaaagaccagtggccatggaatattaggatatatgctgatgaatttggaaac
agcaaaggagatgctgtgctatcttatgaagatccttctgctgcacattctgcaggggga
ttctataacgactacgatatgagaggctacaagattaatgtcacaatggccgcgaagact
gcgcctcgagctccaccttcatatgggcatggaggtgggagaggtggatattccagtggt
ggagataggcgccgagacaattaccatgatgggcggggtcctggacccgataggtaccac
catggaggccagcgctcccgtccatactga
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