Phoenix dactylifera (date palm): 113462683
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Entry
113462683 CDS
T03274
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-B-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113462683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
113462683
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113462683
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
113462683
NCBI-ProteinID:
XP_038984379
UniProt:
A0A8B9AM45
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Position
7:complement(7975196..7976686)
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AA seq
496 aa
AA seq
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MVRGRDLSTELLLKSQLEYARGNHHKAIKLLDTISNRTEPVMLSMYNNNIGCILHQQRSH
HTSNWFFNKALRHSLLLRSEKPLKLAVFSQDRFCLIVHNCGLQHLVCGKPLAAARFFRQV
IPVFGNRPLFWLRFAECCLLLSEKGLLGGSSSGEEIKVHVAGSGKWQQLVVNNVNSRSTD
SDSIAGDAVTSGDDQILISLPFARQCLLNAQLLLDTLDRKMTKLDATDFALEAADPNQKL
SSDSKASNSTSASTTVGASCDPQETNGGTGANTTLQILVAGYEVMGRKENQRIRQAVLGD
LAYVALCLEDPLKALVAARSLQQLPDCSKMYLFLSYVYAAESLCRLNQPIEAAEQLSVFV
TDGRNVELPYTNEDTQKWSDENGADCGELNGSATAKTAVEGTKKTMEESQDMGFLKPEKA
RGVLYVNLAAISAMQGVLEQASHFVKQGLSSLPNNPRVLLAAAYVDLLQGKAQEALVKLR
KCRRIRYLSTNVTISS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtacgtggtagagatttatctacagagctcctcctgaagtctcagttagagtatgct
cgtggtaaccatcacaaggctataaaactattggatacaattagtaacagaacagaacca
gtaatgctcagtatgtataacaacaatattgggtgcatacttcaccagcaaaggtcccac
cacacatcaaactggttctttaacaaggcactgagacacagcttgttgcttcgatcagag
aagcctctgaagcttgctgttttttcacaggacagattttgtctcattgtgcacaactgt
gggcttcagcatttagtatgtggaaagccattggctgcagctcgcttttttcgtcaagtc
attccagtctttggcaaccgaccacttttctggcttcgttttgctgaatgctgtctgcta
ttatcagagaaggggttgctaggtggttcttcaagtggcgaagagattaaagttcatgtt
gctggttcaggcaaatggcagcaactagttgtcaacaatgtgaactcgagatctaccgat
tcagattctatagcaggagatgctgtgaccagtggtgatgatcagatcttgatctcactt
ccatttgctcggcagtgtcttctcaatgctcagcttttattggatactttggatcggaaa
atgacaaaacttgatgccacagactttgcattggaagcggccgatcctaaccagaagctg
agcagtgactcgaaagcatcaaattcaacatcagcgtctacaacagtcggtgcaagttgt
gatcctcaagaaacaaatggtggtacaggtgcaaatactaccttacagattttagttgct
ggatatgaagtcatgggcagaaaagagaaccagagaataaggcaagctgttttaggcgac
ctagcgtacgtggcattgtgcttagaagatcccttgaaggcattggttgctgcgaggtcc
cttcagcagctgccagattgttccaaaatgtatctctttcttagctatgtatatgctgct
gaatcactctgtcgcctgaaccaacctatagaagctgcagagcagttgtcagtctttgtc
acagatggaagaaacgtcgagttgccatacactaatgaagacacacagaaatggagtgat
gagaatggtgctgattgtggggagttgaatggttctgcaaccgccaaaacagctgtggaa
gggaccaaaaaaaccatggaagagtctcaagatatgggtttcctgaagccggaaaaggct
cgtggggtactttatgtaaaccttgctgccatctctgcgatgcaaggggttcttgagcag
gccagccacttcgtaaagcaaggtctctcttctctgcccaacaatccaagagtattgctt
gcagcagcatatgtggatcttctacaagggaaagcacaagaggctctcgtgaagttgaga
aagtgtaggaggataagatacctctctactaacgtgacaattagcagctga
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