Phoenix dactylifera (date palm): 113463439
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Entry
113463439 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP35-like
KO
K14313
nuclear pore complex protein Nup53
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113463439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
113463439
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113463439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113463439
NCBI-ProteinID:
XP_026664548
UniProt:
A0A8B8JAS5
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Position
4:5897516..5901731
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AA seq
348 aa
AA seq
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MSSSRLPGSSKPGRLSPFFRDLASPISAHHRGGRFATPGQAAAVSALWRENLSSSDPPPP
PVFTLDDRADFSPEPALAELHPPSPAARSGSRSRTPPPLSRGGSGSFSRSPLLSSPSVLK
IRAEVNGSEGKQAAPQSPESLSWIHQGEKENGSPVDGVVEQGALLMLPPPREVTRPEAQK
SSIVPNGGLNEEAWVTVFGFSPGDTNLVVRELEKCGPILKHVPGPRDANWMHILYQNQYD
AQKALAKNGTQINNVLIIGVKPVDPMQCQFLTEKHNSINHGGFMVSLPSKLHTATSSAAP
SSLGSLPRPYHPQTRTNAVSDSGHHSAGTIAFPAKSVVSKVRDLMFGI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcccggttgcctggaagctcgaagcccgggcggttgtccccgttcttccgc
gacctcgcctccccgatctccgcccaccaccgcggcggccgcttcgccacacccggccag
gctgccgccgtgtccgccctctggcgggagaacttatcctcctccgacccccctccgcct
cccgtcttcaccctcgacgaccgcgccgacttctcccccgagcccgccctcgccgagctc
cacccaccctcgccggcggcccggtccggcagtaggagccggaccccgccgccgctttcc
cggggcggcagcggctccttttcccgctccccgttgctttcctctccctcggttttgaaa
attagggcagaggtgaatggatccgaagggaagcaggcggcgccccagagccccgagagc
ttgagctggatccaccaaggcgagaaggagaacggttcgccggtggatggagttgtcgaa
cagggggccttgctcatgcttccgccgccaagggaggtgacgaggccggaggcgcagaag
agtagcatcgtgcccaacggcgggcttaacgaggaggcgtgggtcactgtttttggattc
tcccctggtgataccaacttggtagtacgtgagcttgagaaatgtggtccaatactgaaa
catgtccctggtccaagggatgctaactggatgcacattttatatcagaaccagtatgac
gctcaaaaagctcttgcaaagaatgggacacaaataaacaatgttctaataattggggtg
aaacctgtggaccctatgcagtgccaatttctgactgagaagcacaacagcataaatcat
gggggcttcatggtttcattgccctcaaagttacatactgcaacgagttccgctgcacca
agttctttgggatctctccctcgcccctatcatccacaaacccgcaccaacgccgtcagt
gacagcggacaccattctgcaggaacgattgctttcccagcaaaatcagttgtatcaaaa
gtcagggatttgatgtttggcatatga
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