Phoenix dactylifera (date palm): 120106004
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Entry
120106004 CDS
T03274
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120106004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
120106004
Spliceosome [BR:
pda03041
]
Common components
Common spliceosomal components
SR proteins
120106004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120106004
NCBI-ProteinID:
XP_038974753
UniProt:
A0A8B8ZTA8
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MSRRASRTIYVGNLPGDIREREVEDLFYKYGPIVDIDLKNPPRPPGYAFIEFEDARDAEH
AIRGRDGYNFDGHRLRVEFPHGGRGYSSSVDRYSSYSRGGVSRRSTYCVLVTGLPSSASW
QDLKDHMRRAGDVCFSEVFRDGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYIRV
REYDRRRSLSRSRSRSYSRSRSPSWSRNYSQSWSHSRSKTSRGRSAYRSFSRSQSRSVSS
RSDSGSRGRSLSGSQSRSRSPIASPPRDKRVSKRPRRQSPSWSLSRSISPAMSDRSWSVD
SRDL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacgagccagccgaaccatctatgtgggaaacctgccaggagatattcgagag
agagaggttgaggatctgttttacaagtatggacccattgttgatattgatctgaagaat
cctccaaggcctccgggttatgcattcattgagtttgaagatgctcgtgatgctgaacat
gctattcgtggtcgtgatggttacaattttgatggtcacagattacgggtggaatttcca
cacggtggaagaggctattcttcttctgtggaccgttacagcagttatagtcgtggcgga
gtctcgaggcggtccacatactgtgtgctggttactggtttaccttcttctgcctcatgg
caagacctgaaggaccacatgcgtcgtgctggtgatgtctgtttctccgaagtgtttcgt
gatggtggaggcactacaggcattgtagactatacaaactatgatgatatgaaatatgca
atcaggaaacttgatgactctgaattccggaatgcattttctcgggcatatataagggtc
agggaatatgatcggaggcgaagcctatctaggagccgcagccgttcctactccagaagc
agaagccctagctggagtcgcaattatagccaaagctggagccacagccgaagcaagact
tcgagaggaaggtcagcatatcgctcgttttctagatctcaatcaagatctgtttcatct
cgctctgattcgggatcgagggggcgctctctgtcaggatcacaatcaagatccagatca
ccaattgcttcacccccgcgggacaaacgagtgagcaaaaggccaaggaggcagagcccg
agctggagcttatcgcgttctatatctcctgctatgtctgatcgtagctggtctgttgat
tctcgagacctttaa
DBGET
integrated database retrieval system
