Phoenix dactylifera (date palm): 120107146
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Entry
120107146 CDS
T03274
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120107146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
120107146
03029 Mitochondrial biogenesis [BR:
pda03029
]
120107146
Membrane trafficking [BR:
pda04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120107146
Others
Specific organelles associated proteins
Auto phagosome
120107146
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120107146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
ATG16
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_NWD2_C
WDR54
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_IFT122_1st
Cytochrom_D1
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
120107146
NCBI-ProteinID:
XP_038976251
UniProt:
A0A8B8ZPU1
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MSSEEIGRAAIKRAIKALRKRHLVEEGAHAPAIAALSRPLAVQGLEWKEKAESLELELQQ
CYKAQARLSEQLVVEVAECRNSKALVQEKEELVSNLQNEIEPLRDENSQLKKDLEEKTKA
LDLLISENKSVKAQLEKVMLKLKDAEAENKKLIDRWMLEKMKDAEKLNEANALYEDMMQR
FKVASIEQLARQQVDGVIRQSEAGYVEFVESAIPSVCKHTIHAHGGGCGSILFENNSDKL
ISGGQDRTVKIWDTQTGNLSSTLHGCLGSVLDLAVTHDNRSVIAASSSNNMYVWEVSLGR
IRHTLTGHTDKVCTVDASKVSSRNVVSAAYDHTIKIWDLQKGYCINTIISMSNCNALSYN
MDGLTICSGHVDGNLRLWDSRTGKLISEVAAHSQAVTSICVSRSGNLVLTSGRDNLHNLF
DVRTLEVCGTFRANGNRVASNWSRSCISADENCVVAGSADGSIYVWSRLKADMPSILEGH
SSPVLSCSWSGLGKTLASADRNGNVCIWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggaggaaatcggaagggcggcaatcaagcgcgccatcaaagctcttcggaag
cggcacttggtcgaggagggcgcacacgcgccagccatcgccgccctctccagacctcta
gccgtccagggcttagagtggaaggaaaaagctgaaagccttgaactagaactgcaacaa
tgttacaaagctcaagctcggttgtctgaacaacttgtggtggaagtagcagagtgcagg
aactcaaaagctcttgttcaagagaaggaagaattagtatctaacctgcaaaatgaaatt
gaaccattaagggatgaaaactcacagcttaagaaggatttagaagaaaagacaaaagct
ttggatctattaataagcgagaacaagtcagttaaagcacaacttgaaaaggtgatgctg
aaattaaaagatgcagaggctgaaaacaagaaattgattgatcgttggatgttggagaag
atgaaggatgcagaaaagcttaatgaggctaatgccctgtatgaggacatgatgcagcgt
tttaaggtggctagcatagagcaacttgcaagacaacaagttgatggagtaattcgccaa
agtgaagcaggatatgtggaatttgtagaatcagctattccttctgtatgcaagcatact
atccatgctcatgggggtggatgtgggtccatattgtttgagaacaactcagataagctg
atcagcggcgggcaggaccgaacagtcaaaatatgggacacacaaactggcaacctgagt
tccactcttcatggttgccttgggtctgtacttgatcttgctgtgactcatgacaacagg
tccgtaatcgctgccagtagctccaataacatgtatgtatgggaagtaagtttgggtcgt
atacgccatacccttacaggtcacactgataaagtatgcactgtggatgcaagtaaagtc
tccagccgcaatgttgtgagcgctgcttatgatcataccattaaaatctgggacctccag
aaaggatattgcatcaacaccatcatctcaatgagcaactgcaatgccctttcctacaac
atggatggactgaccatttgctcaggtcacgtagatggtaatcttcgactgtgggatagc
cggacagggaagctaattagtgaggtagctgctcattcacaggcagtcacatcgatctgt
gtttctcgaagtggtaatctggtgctaacaagtggaagggataacttgcacaatctgttc
gacgttagaacattggaagtgtgcgggacattcagagccaacgggaacagggtggcatcc
aactggagccgatcatgcattagtgccgatgagaactgtgttgtagctgggtcagcagat
gggtccatctatgtgtggtcaagattaaaggctgatatgccaagcattctggaggggcac
tcttcacctgttctttcatgctcatggagtgggttggggaaaactctagcctctgctgat
aggaatggaaacgtgtgtatatggacatga
DBGET
integrated database retrieval system
