Phoenix dactylifera (date palm): 120108245
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Entry
120108245 CDS
T03274
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04142
Lysosome biogenesis
pda04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120108245
04148 Efferocytosis
120108245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
120108245
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120108245
Hops complex
120108245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS18_solenoid_2nd
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
CBP1_middle
zf_RING_Vps8_fungal
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
120108245
NCBI-ProteinID:
XP_038977758
UniProt:
A0A8B9A1R3
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MYQWRKFEFFEEKSAGKASIPSEIPGQILCCASGRGRIAVGCDDGTVGLLDRGFKLSYGF
QAHASSVLFIQQLKQRNFLVTIGEDEKTSPQLSSICLKVFDLDKIEPEGSSSSMTSPFCV
QILRIFTNQFPEAKIISFLVLEEAPPILLIAIGLDNGSIYCIKGDIARERITRFRLQVEA
VSDKSLFSITGLGFRVEGRTLQLFAVTPSSVSLFSLHDQPPKRQTLDQIGCDANAVTMND
RLDLIIGRPEAVYFYEVDGRGPCWAFDGEKKFLGWFRGYLLCVIADQRSSKNTFNVYDLK
NRLIAHSMVVGEVSHLLCEWGFIILIMSDKKIMCIAEKDMESKLDMLFKKNLYTVAINLV
QSQQADAASTAEVLRKYGDHLYGRQDYDEAMSQYINTIGHLEPSYVIQKFLDAQRIYNLT
NYLEKLHERGLASKDHTTLLLNCYTKLKDVEKLNKFIKDEDAVGEHKFDVETAIRVCRAA
GYHEHALYVAKKAERHEWYLKILLEDLGRYHEALQYISSLEPNEAGVTMKEYGKILVEHR
PAETVGILLRLCTDGSESTMRRTSSSMHLLMLPSPMDFINIFVHSSQSLMDFLERYISKV
KDSPAQVEIHNTLLELYLSDTLSFPSVSQRNGGEDRDLKVISAREVANGSVKESKEKYTV
ENKDVKKEKDCVERQQKGLTLLKNAWTSDMEQPQYDADLAVILCEMNKFKDGLLFLYEKM
KLYKEVIACYMQAHDHDGLIACCKKLGDSTHGGDPSLWGDLLKYFGELGEDCSKEVKEVL
TYIERDDILPPIVVLQTLSRNPCLTLSVVKDYIARKLEQETKLIEDDRKSIEKYQEDTAS
MRKEIQDLRTNARIFQLSKCTACTFTLDIPAVHFMCMHSFHLRCLGDNEKECPECAPEYR
SILETKRNLEQNARDQNWFFQQLKSSKDGFSVIADYFGKGVVSKTSTDPRQIP
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaagttcgagtttttcgaggagaagtccgccgggaaggcttcgatc
cccagcgagatccccggccagatcctgtgctgcgcgagcgggagggggcggatcgccgtc
ggatgcgatgatggcaccgtcggcctcctcgaccgcggcttcaagctctcctacggcttc
caggctcacgcctcctccgtcctctttatccagcagctcaagcaacgcaatttcctagta
accattggagaagatgagaagacatctccccagctatcttcaatttgcttaaaggtgttt
gaccttgataagattgagccggaaggttcaagttcaagcatgactagtcctttctgcgtc
cagatactgcggatattcaccaatcagtttcctgaagcaaagattatttcatttttagtt
cttgaggaagctcctccaatattactgattgctattggtttagataatggttccatctac
tgcatcaaaggtgacattgcacgtgagcgtatcacacgcttcaggctgcaggttgaggct
gtctcagacaagagtctcttttctatcacgggtcttggtttccgagttgaagggagaact
cttcaactctttgctgtcactcctagttctgtaagtttgttcagcttgcatgatcaacca
ccaaagaggcagaccttggatcagattggatgtgatgctaatgccgttacaatgaatgac
cgcctggatctgattattggtcgtcctgaagctgtgtacttttatgaagttgatgggcga
ggtccttgttgggcttttgatggcgagaagaaatttcttggttggtttcgtggatactta
ctgtgtgttattgcagatcagagaagcagcaagaatacctttaatgtttatgatctgaag
aatcggttgattgcccatagcatggtggtaggtgaggtgtcacacttgctatgtgaatgg
ggctttatcattcttataatgagtgacaagaagattatgtgcatagcagaaaaggacatg
gaaagtaagttggatatgttgttcaaaaagaatttatatactgttgcaatcaaccttgta
cagagtcaacaagctgatgctgcttccactgctgaagtgctgcgaaaatatggtgaccat
ttatatggtagacaagattatgatgaggctatgtcacaatatattaacacaattggtcat
ctggaaccttcttatgttatccagaagtttctagatgcacaaaggatctacaaccttact
aattatcttgagaaattacatgagaggggattagcttctaaagaccatacaactcttctt
ttaaactgctacacaaaattgaaagatgttgaaaagctaaacaagttcatcaaagacgaa
gatgctgttggtgaacacaagtttgatgtggaaactgccatcagagtgtgccgtgcagct
gggtatcatgagcatgctttatatgttgcaaagaaagctgagagacatgagtggtattta
aagattttacttgaagaccttggtagataccatgaggcattacagtatatttcaagcctt
gagcccaatgaagctggcgtcactatgaaagagtatggcaagattcttgtagaacacaga
ccagctgaaactgttggtatactcctgagactctgcactgatggtagcgaatcaacaatg
aggaggacctcaagtagcatgcacttacttatgctgccttccccaatggactttataaat
atttttgtacatagctcacaatctctcatggacttcctagaaaggtatatcagtaaggtg
aaggattcacctgctcaggttgaaattcataacacacttttggagctatacctatctgac
accttgagctttccatcagtttcacaaagaaatggtggtgaagatcgtgatcttaaagta
ataagtgctagggaagtggctaacgggtctgtaaaggagagcaaggagaaatatactgtt
gagaacaaagatgttaaaaaggaaaaggattgtgtagaaagacagcagaagggtctaacc
ttgcttaagaatgcatggacgtctgacatggagcaacctcagtatgatgctgatcttgct
gttattctttgtgaaatgaacaaattcaaagatggtctgttgttcctgtacgagaagatg
aaactttataaagaagtgattgcttgctacatgcaggcccatgaccatgatggattgatt
gcgtgctgcaagaagctaggggattcaactcatgggggagatccatctctttggggtgat
cttctcaagtacttcggggagcttggagaagattgctccaaagaagtaaaggaggtcttg
acttacattgagagggatgatatattgcctcccatagttgttctacagacattatctagg
aacccttgcttgacactatctgttgtaaaggattacattgctcgaaagcttgaacaagaa
acaaagctgatcgaagatgaccgcaaatcaattgagaagtaccaggaagatactgcttca
atgaggaaggaaatacaagatctcaggactaatgcaagaatttttcaacttagcaagtgt
acagcctgcaccttcacccttgatattcctgcagtacattttatgtgcatgcactcattt
cacctacgctgccttggggacaatgagaaagaatgcccagagtgtgcaccggaatacaga
tccattttagaaaccaaaagaaatttagagcaaaatgccagagaccaaaattggtttttc
cagcagttgaagagttcaaaggatgggttttctgtaatagcagactattttggcaagggc
gtggtgagcaaaactagtactgatcctcgacaaattccctga
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