Phoenix dactylifera (date palm): 120111050
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Entry
120111050 CDS
T03274
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120111050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
120111050
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120111050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
120111050
NCBI-ProteinID:
XP_038983313
UniProt:
A0A8B7CFX5
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All DBs
Position
6:complement(10607705..10612697)
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AA seq
478 aa
AA seq
DB search
MESDLGKLFIGGISWDTNEDRLREYFESFGDVVEAVIMKDRNTGRARGFGFVVFADPGVA
ERVVKEKHMIDGRMVEAKKAVPRDDQHILKRNSTNAHGSPAPGRTKKIFVGGLASSVTEA
DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEDAVDKVLVKTFHELNGKMVEVKK
AVPKEMSPGPSMRLPIGAYNYGLSRVNSFLNGYTQGYSPSSIGGYGMRMDGRFGALAGGR
NGFPSLGPGYGIGMNFEPGMSPNYGGNSNFNNSLSYGRPLSPYYSGNSNRYSSPIGYSGG
SGSTGSVFSSMARNLWGNSGLNYTTSSASSNAFMASGSGNLGGFGNSNLNWGGSSSPISA
HGVGSGSGYASGSLGYRTGENSFGLGSSNYGRNTGTGSVNPSFTASSNGYEGNYADPYGS
SSIYGDTTWRSASLELDGSGPFSYGLGNAPSDGTAKGSADYMGGYNITNRQTNRGIAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatcttggaaaactttttatcggaggtatttcttgggacaccaatgaagac
cgcctccgggagtacttcgagagtttcggggacgtggtggaggccgtcatcatgaaggac
cggaacaccggccgtgcgcgcggattcgggttcgtcgtgtttgcggaccccggcgtcgca
gagagagttgtcaaggagaaacacatgatcgatggccggatggtagaggcgaagaaagct
gttccgagagatgaccagcacatccttaagagaaacagcactaatgcccatggttctcca
gctcctggtcgcaccaaaaagatatttgttggaggcctggcttccagtgtaactgaggcc
gacttcaagaattacttcgaccagtttgggactatcactgatgttgttgttatgtatgat
cacaacacacaaaggccgaggggcttcggattcattacttttgattcagaggatgctgtg
gataaggtgcttgttaagacctttcatgagctcaatggcaagatggttgaagttaagaag
gctgttcccaaggaaatgtccccagggccaagcatgcgcttgcctattggggcatataac
tatggtctgagcagggtcaatagctttctcaatgggtacactcagggttacagtccaagc
tccataggtggctatggaatgaggatggatggtagatttggggcactagctggtgggcgt
aatggattcccttcattgggtcctggctatggaattgggatgaactttgagcctgggatg
agccccaactatggtggaaactcaaatttcaataacagtctcagttatggacggccattg
agcccttactatagtgggaattctaatagatatagtagccctattggctatagtggaggt
agcggtagtactgggtctgttttcagttcaatggcccgtaacttatggggtaatagtggc
cttaattatactaccagctctgcaagctctaatgccttcatggcatctggaagtgggaac
cttggtggatttggtaatagtaacctgaattggggaggttcctcttctcctatttcggct
catggtgtgggcagtggttcaggctatgctagtgggagtctgggttatagaactggtgag
aatagctttggtttgggttccagcaattatggaagaaacaccgggactggttctgttaat
ccctccttcactgcatcaagcaatggatatgaaggaaactatgcagatccatatggtagt
agttcaatctatggagacaccacttggaggtctgcatctttggagcttgatggatctggt
ccattcagttatggactcggcaatgcaccttcagatggcactgccaagggttcagcagat
tatatgggtggttacaatattaccaatagacaaacaaatagaggaatcgctgcctag
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