Phoenix dactylifera (date palm): 120111559
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Entry
120111559 CDS
T03274
Name
(RefSeq) TBC1 domain family member 5 homolog A-like isoform X1
KO
K18469
TBC1 domain family member 5
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
120111559
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120111559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120111559
NCBI-ProteinID:
XP_038984770
UniProt:
A0A8B7BN36
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Position
1:complement(18790041..18795308)
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AA seq
836 aa
AA seq
DB search
MATSQGETALPEPLSPSRSSSSGSRFSNLRGVRWRIDLGILPNSPASVDDLRRVAADSRR
KYVQLKRRLLVNSHPSKDENRSSGVVMDDPLSQSPDSKWGRFFRNAELEKMLDQDLSRLY
PELGSYFQKAACQSMLRQILLLWCLKHPEYGYRKGMHELLAPLLYVLHVDLQHLSQVQEL
YVDHFNDEFDGTSFSESDMVSDCSFKKTANMNRGTDSEKHFYGGAAKVSCLDKLDPDTRE
LFLMNDAYGAEGELGVILSEKFMEHDAYCMFDAVMSGSHGVVAMADFFSTSPAMGSGTEL
PPVVEASTTFYHLLHIVDSSLHNHLVELGVEPQYFALRWLRVLFGREFSLKDLLLIWDEI
FSSPNHVSPSDIANDADFNLSLLCSPRGAFISAMAVSMLLHLRSSLLATEHATTCLQRLL
NFPKDMSVKKLIEKAKSLQTLAFETNLSSCSPWGGTVRNKRAVRRAHSLSFDSASPRASP
SSLPESYWEEKWRVLHRAEETHKTNGVSILSKIRNGSLKEKFGLFRVELDASMMETASEK
KDVQSSIRHKILDNACQEGDPRVNLGEIGCNENPDISGTKESFYMDAEVGRDSPGEQADQ
NFMGGSSGVAEEACLSAKQLSVLCTAAGPRRMASEHDSEKSSVTSNSFVSDNDCKTGHKE
ELCSSNCRKKLLQDSEATSVTDVKLGQRTSSTQKHAAVLKEQRPLSGKFQWLWKFGRVSG
ERNLDDGKCVEQQKFSDVGGTCKDISEPLTCDGCCNSCGVSRKLEAEHKEVPGTLRSLGQ
SMLENIQVIESVFQQEQRQVGVADNSSSTILEAQGQVKIATALEELRKISGLLLEM
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctcaaggtgagaccgcgttgcccgagcccttgtctccgtcgcggtcgtcg
tcctccgggtcgagattctccaacctccggggagtccgatggcggatcgatcttgggatt
ttgccgaattctcctgcttcggtagatgatctccgacgcgttgctgcagattccaggagg
aaatatgttcaattgaagcgtcgtcttttagtcaattctcatccctctaaggatgagaat
agatcatctggtgttgtcatggatgatccgctatcgcagagtccagacagcaaatggggt
cgctttttccggaatgctgaactagagaaaatgctagatcaggatttgtcacggctgtat
cccgaacttgggagctacttccagaaagcagcatgccagtcgatgttgagacaaatattg
cttctgtggtgtctcaagcacccagagtatggatacagaaaaggaatgcatgaactattg
gctcctctgctttatgtacttcatgttgatttgcagcacctttcccaagttcaagagctc
tatgtagaccattttaatgatgaatttgatgggacctcattttccgaaagtgacatggtt
tctgattgcagttttaaaaagaccgcaaacatgaacagagggactgacagtgagaagcat
ttttatggaggtgctgccaaagtaagttgcctagataagcttgatcctgatacaagggag
ttatttttgatgaatgatgcttatggagcagagggtgagttgggtgttatcttatctgag
aaatttatggaacatgatgcctactgcatgttcgatgctgtaatgagtggttcccatggt
gttgttgccatggcggactttttctctacctctcctgctatgggatctggtacagaatta
cctcctgtagtcgaagcgtcaactacattttaccatttgctgcatattgtggattcatct
cttcataatcatcttgttgagcttggggtagaacctcagtattttgcactccgatggctt
cgtgttttatttggacgtgaattttcactcaaagatcttctactaatttgggatgagata
ttctcttctcctaatcatgtatcaccttcagatatagcaaatgatgcagactttaactta
agtctactttgctctcctcgtggagcctttatttcagcaatggctgtctccatgcttctt
catctaagatcttcactgctagctactgagcatgcaaccacatgtctccagaggttgtta
aattttcctaaagatatgagtgtgaagaagctgatagagaaggccaagtctttgcaaact
cttgcttttgaaacaaatctctcatcatgttcaccctggggaggaacggtcaggaataag
cgagcagtaagaagagcacatagtctttcatttgattcagcttctcctagagcttcaccg
agctcattaccggaaagttactgggaagagaaatggagagtgttgcatagagcagaagaa
actcacaaaacaaatggtgtgtcaattttaagtaagattagaaatggttcgttaaaagaa
aaatttggtttatttcgagtcgaattggatgcctctatgatggagactgcgagtgagaaa
aaggatgttcagtcttccattaggcataagattttagataatgcatgccaagaaggagac
cctagggtgaatcttggtgagattggatgcaatgaaaatcctgatatctcaggcaccaaa
gaatctttctacatggatgcagaagttgggagagatagccctggggagcaggctgatcaa
aatttcatgggagggagttcaggtgtggctgaagaggcatgtttgagtgctaagcagttg
tcagtcttatgcacggccgctggtcctcgtagaatggccagtgagcatgactcagagaaa
agcagcgtcacttcaaattcttttgtttctgataatgactgcaaaactggccacaaggag
gagttatgcagttccaattgccgcaagaaattacttcaagactctgaagctacttctgtt
actgatgtcaaacttggacaaagaactagtagcacacagaaacatgcagcagttttaaaa
gagcagagacctctatctggtaaatttcaatggctttggaagtttggtagagtctctggt
gaaaggaacttggatgatggaaaatgtgtagagcaacaaaaattctctgatgttggagga
acctgcaaggacatatcagagcctctgacttgtgatgggtgctgtaactcctgtggagtc
agcagaaaattagaagcggaacacaaggaggtgccgggcactctgaggtctcttgggcaa
tccatgcttgaaaatatccaggtcattgaatcagtcttccagcaagaacagcgccaggtc
ggcgttgcggataactcatcaagcaccattctcgaagctcaaggacaagtcaaaatagcc
actgctctcgaggagcttcggaaaataagcggcttactactggagatgtga
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