Phoenix dactylifera (date palm): 120112364
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Entry
120112364 CDS
T03274
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03030
DNA replication
pda03410
Base excision repair
pda03420
Nucleotide excision repair
pda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120112364
03410 Base excision repair
120112364
03420 Nucleotide excision repair
120112364
03430 Mismatch repair
120112364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
120112364
03036 Chromosome and associated proteins [BR:
pda03036
]
120112364
03400 DNA repair and recombination proteins [BR:
pda03400
]
120112364
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120112364
DNA Replication Termination Factors
ELG1-RFC complex
120112364
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120112364
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120112364
Check point factors
HRAD17(Rad24)-RFC complex
120112364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_16
AAA_assoc_2
AAA_11
DNAX_ATPase_lid
AAA_24
ATPase_2
DUF815
AAA_5
AAA_14
RuvB_N
AAA_7
AAA_30
bpMoxR
AAA_3
ResIII
nSTAND3
AAA_19
MCM
ABC_tran
TniB
DUF3086
AAA_18
TIP49
AAA_28
Mg_chelatase
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
120112364
NCBI-ProteinID:
XP_038987416
UniProt:
A0A8B7C0M4
LinkDB
All DBs
Position
11:complement(8673608..8685007)
Genome browser
AA seq
355 aa
AA seq
DB search
MAEATAPMEIDGDAPARSNKDKAPLASDGKSAPWVEKYRPQSLADVAAHRDIVDTIDRLT
NENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNLILELNASDDRGIDVVRQQIQDFA
SARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQ
SRCTRFRFAPLDATHIRERLEYVIKAEGLDVAESGLTALVRLSNGDMRKALNILQSTHMA
SQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRYISDIKMRKGLALVDIVREVTM
FVFKIQMPSDVRVKLINNLADIEYRLSFGCNDKLQLGSLISTFTNARSALVAAAQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgaccgctcccatggagatcgacggcgacgcgccggcgaggtccaacaag
gacaaggcccctctcgcctccgacggcaagtccgccccctgggtcgagaagtaccgtccc
cagtccctcgccgacgtcgcggcccatcgcgacatcgtggacaccattgatcggctgacg
aacgagaacaggctgccccatttgcttctttatgggccgccaggtaccgggaagacgtcg
acgattctggcagtggcacggaagctgtatggggcgcagtaccgcaacctgattttggag
ctcaatgcatctgatgatcgggggattgatgttgttcgacagcagatccaagatttcgcc
agtgcacggagcctttcctttggtgcaaaatcttctgtgaagttggtcctgctggatgag
gcagatgctatgactaaagatgcacagtttgcattacgtagagtgattgagaaacatacg
aagagcactaggtttgcacttatctgtaatcatgtcaacaaaattattccagcattacag
tcaaggtgcactcggtttcggtttgctccacttgatgcaactcatatcagagaacgactt
gaatatgtgataaaggctgaagggcttgacgtggctgagagtggcttaactgccctggta
cggctgagcaacggtgacatgagaaaggctctgaacatattgcagtcaacacatatggct
tctcagcatgtaacagaagaatctgtctacctctgcactggaaacccgatgccaaaagac
attgaacagatagcctattggctacttaatgaatcatttacagccagtttcagatatata
tctgatattaaaatgaggaaaggactggccttggttgatattgtgagggaggttacaatg
tttgttttcaagatccaaatgccatcagatgtccgagttaagctaatcaacaatttggct
gatattgagtatagattaagttttggatgcaatgataagttacagcttggatcgcttatc
tctacattcacaaatgctcgttctgctctggttgctgcagcccagtga
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integrated database retrieval system
