Phoenix dactylifera (date palm): 8890543
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Entry
8890543 CDS
T03274
Symbol
rpoA, PhdaC_p054
Name
(RefSeq) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8890543 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
8890543 (rpoA)
03400 DNA repair and recombination proteins [BR:
pda03400
]
8890543 (rpoA)
Enzymes [BR:
pda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8890543 (rpoA)
Transcription machinery [BR:
pda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
8890543 (rpoA)
DNA repair and recombination proteins [BR:
pda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
8890543 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
8890543
NCBI-ProteinID:
YP_003540963
UniProt:
D4PBE3
LinkDB
All DBs
Position
Pltd:complement(80044..81057)
Genome browser
AA seq
337 aa
AA seq
DB search
MVREEVVGSTRTLRWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKVAHEYSTIVGIEESVHEILLNLKEIILRSNLYGVIDASICVRGPRYVTAKD
IISPPYVEIVDTTQHIANLTEPIDLCIELQIKRDRGYRMKSANNSQDGSYPIDAVSMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEDINFE
ENKNRFPLPLFTFQDRLTNLKKNKKGIPLKCIFIDQSELPSRTYNCLKGSNIHTLSDLLN
NSQEDLMRIEFFRIEDVKQILDTLQKYFAIDLSKNKF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagaggaagtagtaggatccactcgaacactacggtggaaatgtgttgaatca
agagtagacagtaagcgtctttattatggtcgtttcattctgtccccgcttatgaaaggt
caagccgataccataggtattgccatgcgaagggctttacttggagaaatagaaggaaca
tgtatcacacgtgcaaaatctgagaaagtagcacatgaatattctacgatagtaggtatt
gaggaatcagtacatgaaattttactaaatttgaaagaaattatattgagaagtaatctg
tatggagttatagacgcatccatctgcgtcagggggcctagatacgtaaccgctaaagat
attatctcaccaccttacgtggaaatagttgacacgacacaacatatagctaacctgacg
gaaccaattgatttgtgtattgaattacaaatcaagagagatcgcggatatcgtatgaaa
tccgcaaataactctcaagatggaagttatcctatagatgctgtatccatgcctgttcga
aatgcgaatcatagtattcactcttatgggaatgggaatgaaaaacaagagatacttttt
ctagaaatatggacgaatggaagtttaactcctaaggaagcactttatgaagcttctcgt
aatttgattgatttatttattccttttctacatgcggaggaagaggacattaatttcgaa
gaaaataaaaacaggtttcctctacccctttttacctttcaagatagattaactaatcta
aagaaaaacaaaaaaggaattccattgaaatgtatttttattgaccaatcagaattgcct
tccaggacctataactgtctcaaagggtccaatatacatacattatcggaccttttgaat
aacagtcaagaagatcttatgagaattgaattttttcgaatagaagatgtaaaacagata
ttggacactctgcagaagtatttcgcaattgatttatctaagaataagttttaa
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