Paramisgurnus dabryanus (large-scale loach): 135718480
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Entry
135718480 CDS
T10799
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135718480
04121 Ubiquitin system [BR:
pdab04121
]
135718480
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
135718480
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
135718480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
zf-BED
DBD_Tnp_Hermes
FAM200-ZBED5_RNase-like
DUF8247
Microp_apicomplexa
TetR_C_15
Motif
Other DBs
NCBI-GeneID:
135718480
NCBI-ProteinID:
XP_065096821
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Position
10:29826527..29831155
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AA seq
604 aa
AA seq
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MRARVYCACALTHADTRKMKRTRRSYVWDHFRLNGDNVNCKHCDCTLKYSTATSTMIYHL
KNAHPGVSVTGQESTQPKITSFLPGKITGAQKAEGITQRLCKMIAKDMLPISVVEGDGFR
ELINFIQPDYSIPSRGTVTNRLKDQYEQKKEELKMALSSVEKIALTTDCWTALTRESYIT
ITCHYIDCEWQMKSAVLLTESFSDRHTSEKLAERLNEAVASWGITAKVIACVHDNAKNIV
AANDRTRVSWGSVACFAHTLQLAINDGFNIYLNRVIAAAGRLVQHFNHSTVATKALRDKQ
VQMKLPPHRLIQSCKTRWNSVSDMFARLVEQRWAVTAVLSERTVTKLADPRILELKDEYW
QLMEDVAPVLAALKCATTVMSTESEVSISNIYPITFGLLQSHLMRNEEDSARVSEFKEKV
RNSLTQRMQVHSDELPSKPAMIATMLDARHKNLVFLMSSEKRLTANAKLRELASAVDPIG
SENANTVTENAPEVDARCDNGKSALRMLLGDHYNEKCINDSENEVNNFLREQPPSLDTSA
LDWWKANASRFPRLSRLAKGYLSIPGTSVPSERVFSAAGLTVNRLRTRLTPENVNMLIFL
NKNQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacgtgtgtactgcgcatgcgcattaacacacgcagacacgaggaaaatgaag
cgaacgcggaggagttatgtttgggaccatttcaggttaaacggtgataatgtcaattgt
aaacactgcgattgtacgttaaaatacagtacagcaacgagcactatgatatatcattta
aagaatgcacatccaggggtttccgtgacaggacaggagtcaacacagccaaaaataacc
tcctttttacccgggaaaataactggagctcaaaaggcagaaggaataacacaacgacta
tgtaaaatgattgcaaaggacatgttacctatcagcgtcgtcgaaggtgatggttttcga
gaattaattaactttattcagccagattacagcataccttcaagaggcaccgtaaccaat
cggctaaaagatcagtacgaacagaaaaaagaggagctaaaaatggcactgagttctgtt
gaaaagatcgccctcacaactgactgctggaccgctctaaccagagaaagctatataacc
atcacatgccattacattgactgcgaatggcaaatgaagtcagcagtcctgcttacagag
agcttctctgacagacacacctccgaaaaacttgctgaaaggctaaacgaggccgtggca
tcttggggaattacagctaaagttatagcctgtgttcatgataacgccaaaaatatagtg
gccgcaaacgaccgaactcgcgtcagctggggatctgtggcctgctttgcccacacatta
caactcgccataaatgatggcttcaacatctatttaaaccgggtcatcgcggcagctgga
agacttgttcagcacttcaatcatagtactgtagctactaaagcacttcgtgacaaacag
gtacaaatgaaacttccaccgcatcgcttgattcaatcctgcaagacgaggtggaactca
gtcagtgatatgtttgcccggcttgtggaacaaaggtgggcagtgactgcggtactgtca
gagcgcactgtcaccaagttagcggaccccagaatccttgagcttaaagacgaatactgg
cagctgatggaagacgtggcacctgtgttggcagcattaaagtgtgccacgactgtaatg
tctacagaatctgaagtgtctatttcaaacatctaccctatcactttcggcctcttacag
tcgcatcttatgagaaatgaagaggacagcgctcgggtttcggagttcaaagaaaaagtg
cgtaactcattgacgcaaagaatgcaggttcactccgatgaactaccatcaaaaccagcc
atgatcgcaacgatgctggatgccagacacaagaacctggtctttttaatgtcatccgag
aagagactgactgccaacgcaaagctgcgcgaattggcatccgcagtggatccgatcggg
tcagaaaatgcaaatacggttactgaaaatgcgccggaggtcgatgctagatgtgacaac
gggaaaagtgcccttcgtatgctgcttggggatcattataacgagaagtgcatcaacgac
tctgaaaacgaagtgaacaactttcttagagaacagcctccttcacttgacacaagtgct
ctagattggtggaaagccaatgcctccagatttcccagattgtctcggctggcaaaaggg
tatttaagcatacctggaacatctgttccatcagaacgcgtgttttcggcagctggcctg
accgtcaacagacttcgcacgagactaaccccggagaatgttaatatgttgatcttttta
aacaaaaaccagtga
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