Paramisgurnus dabryanus (large-scale loach): 135718937
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Entry
135718937 CDS
T10799
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135718937 (rbm39a)
Spliceosome [BR:
pdab03041
]
Common components
Common spliceosomal components
General mRNP proteins
135718937 (rbm39a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
PRP38_assoc
RRM_occluded
RSRP
RBD_DEAH11
RRM_7
CDC45
Transformer
Motif
Other DBs
NCBI-GeneID:
135718937
NCBI-ProteinID:
XP_065097386
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All DBs
Position
14:complement(16824917..16832350)
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AA seq
525 aa
AA seq
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MADDLDIEAMLEAPYKKDDNKSLSTNGHEERSKKKKKSKSRSRSKSRERKRSKSRDRKKS
HDRRRSRSKDRKRSRSKERRRSRSRSRERGGRYKPPFSGLKFNGGPRGKTGPPPAIKLSR
RRSRSKSPFKKDKSPVRLPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHC
FQLSNMFNPNSENEHGWEVEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPTIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacattgaagcaatgctagaggctccttataaaaaggatgacaac
aagtccttaagtaccaatggccacgaggagcggagcaagaagaaaaagaagagcaagagt
cgcagcagaagcaagagccgggagaggaaaagaagcaaaagtcgtgaccgtaagaagagt
catgaccgcagacggagtcgcagtaaagaccggaagcgcagccgcagcaaagagaggcgc
cgtagccgttccaggagcagggagcgtggcggtcgttacaaacctcctttttctggcctg
aaatttaacggtggtcccagggggaagactggccccccacctgccatcaaactaagccgc
agaaggtccagaagcaagagtcccttcaagaaagacaaaagccctgtgagactgcctatt
gataacctcacgcccgaggagagagatgcacgcacagtgttctgcatgcagctggcagct
agaatccgaccacgagacctggaggaattcttttctgcagtgggaaaagtgagagatgtg
cgaatcatttctgacagaaactccagaagatccaagggtattgcttacattgagtttgtg
gattccacctctgtacctttagctattggcctgtctggacaaagacttcttggagtaccc
atcattgtccaggcttcacaggctgaaaagaacagagcagctgctttggccaacaacttg
cagaagggcagttcaggacccatgaggctgtatgtcggctcattgcattttaacataaca
gaggacatgctcagagggatctttgaaccatttggaaggattgatagtattcagctgatg
atggacagcgaaacaggaagatccaaaggatacggcttcatcacattttctgatgctgaa
tgtgctaagaaggctctggagcagcttaatggctttgagttagcgggcaggccgatgaaa
gtaggacatgtgacagagcgtactgacgcatccactgcaagctccttcctggacaatgat
gagctggaaaggacaggcattgatctgggaactactgggagacttcaactaatggccaga
ctggctgagggtactggtctgcagattccacccgctgcacagcaggctcttcagatgagt
ggctcaatggtagccatggctgctgctactgctgctatgaaccctgggttgagttttaac
attaatgtgcccacaaaccaagctttgaatctaccatcccaaccaatcgcaacacactgc
ttccagctttccaacatgtttaatccaaactcagaaaatgagcatggttgggaagttgaa
attcaggatgatgtcattgaggagtgtaacaaacatggaggagtcatacatatatatgtg
gacaagaaatccgctgaaggtaatgtctatgtgaagtgtccaaccattcctgctgctatg
gctgcagttagtgcattacatggacgctggtttggaggtaaaatgatcacagcagcttac
gtccctcttcctacatatcacaatcttttcccagagtctgtgcaagccacacagcttctt
atgcccagtcgccggtga
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