Paramisgurnus dabryanus (large-scale loach): 135718960
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Entry
135718960 CDS
T10799
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135718960 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135718960 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pdab04052
]
135718960 (csf1a)
Cytokines and neuropeptides [BR:
pdab04052
]
Cytokines
CSF and other factors
135718960 (csf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
SOSSC
EC042_2821
Motif
Other DBs
NCBI-GeneID:
135718960
NCBI-ProteinID:
XP_065097452
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All DBs
Position
14:complement(17332052..17344115)
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AA seq
520 aa
AA seq
DB search
MNTHITAHKAKVRHQWVVLILCFYLVYAGVPGPCKHSVTQGHLLNLRRLIKNQLQNGCSI
TYAFTERQNLSVVCYVKAAFPHILELLNTQFRYAKDSDNYRYTNSLKNVIYNIYSQGCIP
LINEELENSPVKTHMTLAKAALEKAEEVIRMYVDLMTKSDKPVDWNCEDEEYTDDYPESS
TEPFSQSSGVSQCPCTCPASSSGSTKTSLPTNQWNIYLKSTPFPPKRLSFSPVDNLESND
GRSEQPKSETKQQGPKSKPAQWISTTMTPIKGDLNDFPIGSSSVLMDKSSDSEMEYTPSS
GVSPSLITIKELPDFLPGTTDFIIQSTAPDPYQQDTGDSIQRSTAILLAKRSLDSISQEG
SSNSHNKLLQTWLSTTSDPTDVLKTVETGILPVAKDKPFQMLRMSKHMVPVTSTGLPSLI
TDVHLSEHLNTLVEQLGQTHSPHENVQIHTHKPIKENKKIIKPIRETRLSKDSRSQEIHT
TKDDQDRGRQMNSAMTRSSGSFISFSCVLIITLVCGGLLL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacataacagcccacaaagccaaggtaaggcatcagtgggtcgtccttatc
ctgtgcttttatttggtctatgctggtgtgccaggcccatgtaagcactctgtcacccag
ggccatctcctgaatttaagacgtctgattaaaaaccagctgcaaaatggttgttcaatc
acatacgctttcactgaacgtcagaacctgagtgttgtgtgttatgtcaaagcagccttc
ccacacatacttgagctactcaacacccagttcagatatgccaaagattcggacaattat
cgttacacgaattcactgaaaaacgtgatctacaacatatattcccagggatgcatccct
ttaatcaatgaagagcttgagaacagcccagtgaaaactcacatgaccttggccaaggca
gctttggagaaagcagaggaggtgattcgcatgtacgtggatctgatgacaaagagtgac
aagcctgtagactggaactgtgaggatgaggagtacacagatgattacccagaatcctct
actgaaccattcagccaatcatcaggtgtctcacaatgtccatgcacttgcccagcatca
agtagtggatcaacaaagacatcactgcccacaaaccagtggaatatttacctaaaatct
actccatttccaccaaaaagactgtccttttcacctgtggacaacttggagagtaatgat
gggagatctgaacaaccgaagtctgaaactaaacagcaaggaccaaaatcaaagccagct
caatggatatctactacaatgacaccaataaaaggagatttaaacgacttccccattggt
agctcttcagttttaatggataaaagctcagattcagagatggagtatacgccgtcctcg
ggtgtttccccttctttaataactataaaggaattacctgatttccttcctggtacaact
gattttataattcaatcaaccgcgcctgacccatatcaacaagacacaggagacagcatt
cagagaagtactgccattttacttgccaagaggtctttagattccataagccaagaagga
tcatctaattcccataacaaattgcttcagacctggctttctacaacatctgacccaaca
gatgttttaaagaccgtggagacaggaatccttcctgttgcaaaagataaaccctttcaa
atgcttcgaatgagcaaacacatggtaccagtaacaagcacaggactgccttctttgata
acagacgtgcatttgtccgaacatttgaacaccctggttgaacaacttggtcaaacacac
agtcctcatgaaaatgttcaaatacacacccataaaccaataaaggagaataaaaaaatc
ataaaacccatccgtgagacaagactcagtaaagacagcagatcccaggagatccacact
actaaagatgatcaagatagaggaagacagatgaactctgccatgacaagaagcagcggt
tcattcatctcattcagctgtgtactcataattacattggtgtgtggtggacttctgctt
tga
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