Paramisgurnus dabryanus (large-scale loach): 135719168
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Entry
135719168 CDS
T10799
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135719168 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135719168 (pbrm1)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135719168 (pbrm1)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135719168 (pbrm1)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
135719168 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135719168
NCBI-ProteinID:
XP_065097826
LinkDB
All DBs
Position
14:complement(25394884..25412393)
Genome browser
AA seq
1585 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFEDSQSTSIPSTSRKRRRITNIPTVDPIAVCHELYNTIRDY
KDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQLTADFQLLF
NNAKSYYKPETPEFRAACKLWDLYIRTKNEFVQRGDYDDDEDDGEDAQEIPSGSTEEESV
SSLKEVLGQLLEAALTYTEHGRLISELFQRLPSKVQYPDYYAIIKEPIDLKTIAQRIQMG
FYKSVNHMAKDIELLAKNAKTYNEPGSQVFKDANTIKKIFAQKKMELEHAEPVKTSIRIR
NRRFAQGDRLSSITTALQYGSESEEDTILTGSVHYDEGESEAESSLSSMDMSNPIFQMYE
AVRGVRNSQGQLLAEPFHQLPSRKDYPDYFQQISHPISLHQIRSKMRNNEYESVEQIDVD
LNRMFENAKRYNVPNSQIYKRVLKLQQILQMKKRELMRRDDEDDSMLSSTLSDGGSIKRK
SHKKNTKKNRMKALYAAVAEAREMGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLRSVD
HNIRSDRYPSEDSMIEDMKLMFRNARHYNEEGSQVYNDANILEKILREKRRELGPPPDDD
DIISPKLKIRKSGVSPKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRAEL
PDYYVAIKRPIDMEKVKGHMLSNKYQDVDALVEDLVLMFNNACTYNEPESLIYKDALVLH
KVLLETRRDLEGGEDAHVPDVARLIQELVRNLFVSVLGHQDDEGRCYSDSLAEIPAVDPN
NPDKTPLNFEIVRANVDKGRYRRLDVFQDNMFEVLEKARRLHRTDSEIFEDSVELQQFFI
RIRDELCKNGEILLSPALSYTTKHLHSDVEKEKKEKLPKENEEDKLKREEEKKEAEKSED
SSSGGWQGVLQRNFSQDCSFKDSMYHVGDYVYVEPTEPNLQPHIVCIERLWQDDAGEKWL
YGCWFYRPNETFHLATRKFLEKEVFKSDYYNKIPVNKILGKCVVMFVKEYFKLQPDSFRP
EDVFVCESRYSAKTKSFKKIKMWTMPLSSVKFVPREVPLPVVRVASMFAPKQDSEKLPEM
PDDGKAAPSVIDKEREDVPMEVSNGEPGCQYYEQLCYNDMCLKVGDCVYIRSHGLVRNRV
GRLEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCITGKCTVS
SFKDFLSCRPTEMPEEDVLLCESRYIESEKQMKKFKGLKRFSLSAKVVEDEIYYFRKLIV
PQKEPSPLLDKKIEELEAKFADMTDEELEDLGDDDGDGSDAHCMPRHHTPLTSDMELLHY
APPQSTPKSIKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERTAHQLNPRAGTPIGALMGVVPPPIPMGMLSHSMTP
MAGINGMAPGSTGNTYGTQMGVMNSGQQNPPPYPGQVGQAALQQPSTPIFVAPPPKPQRL
LHSDAYLRYIEGLSAESTTVSKWDQTLSARRKDVRLTKEQESRLPSHWLKSKGAHKTMAD
ALWRLRDLMLRDTLNIQQTYNIQNI
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgaagcgacggagagccacgtctccgtccagcagtgtgagtggaggagatttt
gaggacagccaaagcacatccataccttcaactagcaggaagagaagaagaatcacaaat
attcccaccgttgaccccattgctgtgtgtcacgagttgtacaacactatcagagactat
aaggatgatcagggcagaatgctttgtgaactttttatcagagcaccaaaaagaaggaac
cagccagattactatgatgtggtgtctcagcccatagacatgatgaagatccagcagaag
ctgaagatggaggagtatgatgatgttgaacagctcacggccgatttccagctccttttc
aacaatgccaagagttattacaaaccagagactccagaattcagggcggcgtgtaaactt
tgggatctgtatatccgtaccaaaaacgagtttgtgcagcggggggactatgacgatgat
gaagacgatggggaagatgcgcaggaaatcccttcaggctccacagaggaggagtctgtc
tcaagtcttaaggaagtactcgggcagctcctggaagctgcgctgacatacacagaacat
ggacgtctcatcagcgagctcttccagagacttccctctaaagtgcaatatccagattat
tatgctatcattaaggagccgatagatctgaagaccattgcacagagaatacagatgggc
ttctacaaaagtgtaaaccatatggcaaaagacattgagctgttagccaaaaatgccaaa
acctacaatgaacccggatcacaagtatttaaagatgcaaatactatcaaaaagatcttt
gcacagaagaagatggagcttgaacatgctgaaccggttaaaaccagcatcagaatcagg
aacagaaggtttgcacagggagatcgtctctcttctatcacgacagctcttcagtacggt
tcagagagtgaggaagacaccatactgactggctctgttcattacgatgagggtgaatct
gaagcggagagcagtctttccagcatggacatgagcaaccccatctttcagatgtatgag
gccgtgcggggtgtcaggaacagtcaggggcaactcttagccgagccctttcatcagctg
ccctccaggaaagactaccctgactacttccagcaaattagccatccaatatccctccac
cagataaggagtaagatgagaaacaatgagtatgaaagtgtggaacagatagatgtggat
cttaaccggatgtttgagaacgcaaagcgctacaacgtcccgaactctcaaatctacaag
cgcgtcctaaagttgcagcaaatattgcagatgaagaaaagagaactgatgaggagagat
gatgaagatgacagcatgctttcatccacactttctgatggaggcagcatcaagcgcaaa
agccacaagaagaacacaaagaagaaccgcatgaaggctctgtacgccgctgtggcggag
gcccgggagatgggcacgggacggagactatgtgacctcttcatggtgaagccctcaaag
aaagactacccagattactacaagatcatactggagccaatggacctgaggagcgtagac
cacaacatccgctccgacaggtatcccagcgaggactccatgatagaggacatgaagctg
atgtttcgcaatgcacgtcactacaatgaagaaggatcacaagtttacaacgatgccaac
attcttgagaagattttgagagaaaaacgaagggaactcggacccccgcccgatgatgat
gacatcatttcacccaagctgaaaatcaggaaaagtggcgtctctcctaaaaagtccaag
tacctgacgcctttgcagcagaaactcaacgagctctatgaagccgtgaaaaactacacc
gacaagcgcggacgtcgcctcagcacaatcttccttcgtcttccgtcccgtgccgaactt
cccgactactacgttgccatcaagagacctatagacatggagaaggtcaagggtcacatg
ctgtccaacaagtaccaggatgttgacgcacttgtggaagacttggtcctgatgttcaac
aatgcttgcacctacaacgagcctgaatcgctgatctacaaagacgcactggtgcttcac
aaagtgcttttggagaccaggagagacttggagggtggcgaagatgctcacgtcccggat
gtcgcgcgacttattcaggaactcgtacgcaacctttttgtgtcggtgcttgggcaccaa
gacgatgaaggtcgctgctatagcgactcgctggcggagattccagcagttgatcctaat
aatcctgataagactccgttgaacttcgagatcgtcagagcaaacgtcgacaagggacgc
tatagaagactagacgtgtttcaggataacatgtttgaagtcttggagaaagccagacgc
ctacataggacggattcagagatctttgaggactctgtggagctccagcagttcttcatc
cggatcagagacgagctgtgcaagaacggagagattcttctgtcgcctgccctcagctac
acaaccaaacatctgcacagcgatgtggagaaggagaagaaagagaagctgccgaaagag
aatgaagaggataaactcaagagagaagaggagaagaaagaggctgaaaagagtgaagat
tcgtcaagtggtggatggcagggagtcctgcagcgtaacttcagccaggattgcagcttt
aaggatagcatgtatcatgtgggagattatgtgtatgtggagccaacagaaccaaacctg
caaccgcacatcgtctgcatagagcgcctctggcaggatgatgcaggagagaagtggctt
tacggctgctggttttacagacccaatgaaacatttcacctggccacacggaaatttctg
gagaaagaagttttcaaaagcgactattacaacaaaattcctgtcaataaaatattgggc
aaatgcgttgtcatgtttgtgaaggagtatttcaaacttcagcccgacagcttcagacct
gaagatgttttcgtttgcgagtctcgctattctgcgaagaccaagtccttcaaaaagatc
aagatgtggacgatgcccctaagttctgtgaagtttgttccccgtgaagtgccgttaccc
gtggtccgcgtggcctcgatgtttgcccctaaacaggacagcgagaagcttcctgagatg
ccagatgatggcaaagctgcaccttctgtcatagataaagagagggaagatgttcccatg
gaggtcagtaatggagagccgggttgccagtattacgagcagctctgctacaatgacatg
tgtttgaaagtgggagactgtgtctacatccgctctcatgggctcgtacgcaaccgcgtg
ggcagattagagaagatgtgggtgcgagatggagcagcctactttttcgggcccatcttt
atccaccctgaagagaccgaacatgagccaactaagatgttttacaagaaggaagtgttc
ctcagcaacctggaggaatcctgccctatgacttgtataacagggaagtgtacagtgtct
tcttttaaagatttcctgtcatgccggcctaccgaaatgccagaggaagacgtgctgttg
tgtgagagccgctacattgaaagtgagaagcaaatgaagaagttcaaagggctgaagcgc
ttctctctgtctgccaaagtagtcgaggatgagatctactacttcagaaagctcatcgtc
ccgcagaaggagccgtctccactgctggacaagaagatcgaggagttggaggccaagttt
gccgacatgacggatgaagagttggaggacttgggtgatgatgatggagacggttcagat
gctcactgcatgcctcggcatcacaccccactgaccagtgatatggagctgctgcattac
gcccctcctcagtccacaccaaagtcaataaaggggttgtcgaagaaagaaggggcgaag
aggaagatcaacatgagcggttacatcctcttcagcagcgagatgagagccgtcattaag
gcccagcatcctgacttctcttttggggagctcagtcgactggtgggcactgaatggaga
aacctggaggctactaagaaagcagagtatgaagagcgggcagctaaggtagcggagcag
caggaacgagaacggacggcgcatcagctgaacccgagagcaggtaccccaataggggcg
ctcatgggggtggtacctcccccgatccccatggggatgcttagccacagcatgacacct
atggcaggtataaatggaatggcaccgggttcaaccggaaacacttatgggactcagatg
ggtgtaatgaactcaggccaacagaatcccccaccctacccgggacaggtcggtcaggcc
gctctgcagcagccctccacccctatatttgtagctcctccacccaaaccccaacgcctc
ttacattcagatgcatatctgcggtatatagagggtctgagcgctgagtccactactgtg
agcaaatgggaccaaacactgtctgctcgcaggaaagacgtgcggctcacaaaagagcaa
gagagccgtcttccctcccactggctgaagagtaagggagctcataagactatggccgac
gctctctggcgattaagggacctaatgctccgagacacactaaacattcaacaaacatat
aacattcaaaacatctaa
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integrated database retrieval system
