Paramisgurnus dabryanus (large-scale loach): 135719297
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Entry
135719297 CDS
T10799
Symbol
tcerg1a
Name
(RefSeq) transcription elongation regulator 1a isoform X1
KO
K12824
transcription elongation regulator 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135719297 (tcerg1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135719297 (tcerg1a)
Spliceosome [BR:
pdab03041
]
Complex A
U1 snRNP components
U1 related factors
135719297 (tcerg1a)
Complex B
135719297 (tcerg1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW_TCERG1
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
135719297
NCBI-ProteinID:
XP_065098015
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All DBs
Position
16:complement(33859232..33887203)
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AA seq
1038 aa
AA seq
DB search
MAEHTETESIGLVANSMAQQPALHFPSTAPPPANPASRRQPLLSTPVPPFAMMRGPPPSA
QPPFGRIPYDPSVPPPMGAPPLQRAQFMPPPTGSMPPPPGMIFPPGIPPAASPAPPSLSS
TEEIWVENKSPEGKVYYYNARTRESAWTKPEGVKVIQQAELGPLMLSQAAAAAAAAAGGG
NTGPGSSPSIPTATSSNATSHSSQTPPTVMIATSSPSITSAPPLLPTPATAPEVVEMSSA
VTTTHCAMSAPLAAVNPPTVTVAMTTGPPPLSVALPHTVPQSAATMQGFPPVMVPPFRVP
LPGMPIPLPGVAMMQIVSCPYVKTISPTKNGMLPGMAPPLVPMMPHQMTLAAGPPGLPGG
LGTSDWTEFRTPDGKSYYYNKHTQETTWEKPEELKKTEKENEKIKDPMMDMIDADIMDME
DGSPKIEPPKEQKEELKDIEMTDQQKAAIKAKPVATTPIPGTPWCVVWTGDERVFYYNPT
TRLSMWERPEELVGRADVDKAIQEPPHKKGLDNSYRQPVLAKEEPEPVLAENIPEDEPNK
AKRRKIEEKDLDTEKEAAMEAELKAARERAVVPQEARMNQFKDMLLERGVSAFSTWEKEL
HKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQVKDDFRKMMEEAKLNVRT
TFSEFAAKHARDSRFKGVEKMKDREAIFFEFMTALRKKEKDNSKNRGDKVKQDFFELLSD
YHVDGQQRWSKVKEKMETDPRYKAVETSAVREELFKNYVERLAKNPNSDKEKELEKQARI
EASLRERERAVQRFRSEQTKEIDREREQHKREEAVQHFKALLSDMVKSPDANWSETRRTL
RKDHRWESSSLLEREEKERLFNEHIEALAKKKKEHFRQLLDETISVCSGFKQSVFNVSPS
SLTDFHPLHQITLMSTWKEIKKIIKEDPRCIKFSSSDRKRQREFDDYIKDKYITAKADFR
TLLKETKFITYKSRKLMHESEQHLSDLEKILQKDKRYLVLECVPDERHKLLMSYVEELDR
RGPPPPPTAFEPARRSTK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcacacagagacagagagcattggccttgtcgctaacagcatggctcagcag
ccagcactacatttcccttccactgctcctcctcctgctaacccagcgtcccgcagacag
ccgttactgagcacccctgtgcctccttttgccatgatgaggggtcctccaccttctgcc
caacccccttttggacgaattccttatgatcccagtgtgcctccgcccatgggtgcccca
cctttacagagagcccaattcatgcccccaccaacgggatccatgccacctccacctggc
atgattttcccaccaggaattccccctgcagcttctcctgctccaccttcgctgtcctct
acagaagagatctgggtggagaacaagagtccagaaggaaaggtgtattactataacgca
cgtacacgggagtcagcgtggacaaaacctgaaggcgtgaaggtgatccagcaggcagag
ctgggtccactaatgctgagccaggcagcggcggcggcggcagcagcagcgggcgggggt
aacactggacccggttcatcacccagcatcccaactgcaacaagcagcaatgccacctca
cacagctctcagactcctcccacagttatgatcgccacctcctcccccagcattacttca
gctcctcccctccttccgacacctgcgacagccccagaagtcgtggagatgtcgtccgct
gtgaccacgacccattgtgccatgtcagccccattagcagctgtcaatcccccaacagtg
acggtcgccatgacaacaggaccgccacccctgtcggtggcattgccccatactgtgcca
cagtctgcagctacaatgcaaggattccctcccgtcatggtgcctcccttcagagtgcct
ctgcccgggatgcccattccactgcctggtgtagcaatgatgcagatagtaagctgtccc
tatgtaaagactatctctcctaccaaaaacggtatgctccctggcatggcaccaccctta
gttcctatgatgccccatcagatgacgttggcagccggacccccaggattgcctggaggt
ttgggcacatccgactggactgagttcagaaccccagatggaaagtcctactattacaac
aaacacacacaggagaccacctgggagaaacctgaagaacttaaaaaaacagaaaaagag
aatgagaagatcaaagacccaatgatggacatgatcgatgctgacatcatggacatggaa
gatggaagcccaaaaattgaacctcctaaagaacagaaagaggagctgaaagacatcgag
atgacagaccaacagaaagcagcgataaaagcaaagcctgtggcaacaacccccatccct
ggcacaccatggtgtgtggtgtggacgggcgatgagcgagtcttttattataaccccacc
acacgtctgtccatgtgggagcggccggaggagctggtgggtcgtgctgatgtcgataaa
gccatacaggaaccaccacacaaaaaaggcctggataacagctacagacaaccagtgttg
gctaaagaggagccagagcctgttttagctgaaaatatacctgaagatgaacccaacaag
gccaagagaagaaaaatagaggaaaaggatttggacacagaaaaggaggcagccatggag
gcggagctaaaggcagcacgcgagagagccgtggttcctcaggaggcccggatgaatcag
tttaaagacatgctgcttgaacgaggggtctcggcgttttctacctgggagaaggagctt
cataagatagtttttgatccacgctatctgctgctgaatcctaaagagagaaagcaggtg
tttgatcaatacgtgaagacccgcgctgaggaggagcgtaaggagaagaaaaataaaatc
atgcaggtgaaagatgacttcaggaaaatgatggaggaagctaagctcaatgtcagaaca
acatttagtgagtttgctgctaaacatgcaagggattcacgctttaagggcgtcgagaag
atgaaagacagagaagccatttttttcgaatttatgacggccctccggaagaaggagaaa
gacaactcaaagaatcgtggagacaaggtcaagcaggacttctttgaactgctgtcagat
tatcatgtggatggccagcagcgctggagcaaagtgaaggagaagatggaaacggaccct
cgctacaaagccgtggagacctcagcagtccgggaggaacttttcaagaactacgtagag
cgcctggccaagaacccaaactcagacaaagagaaggaactagagaagcaggcccggatc
gaggccagccttagggagagagagcgggcggtgcagagattccgttcggaacagaccaaa
gagatcgatcgggagcgcgagcagcacaagagagaagaggccgtccagcattttaaagca
ctcctgtctgacatggtcaaatcaccggatgccaactggtcggagacgcgtcggacgctg
aggaaggaccaccgctgggagtcttcctcgctcttggagcgagaggagaaagaaaggctc
ttcaatgagcacatcgaggccctcgccaagaagaaaaaggagcattttcgccaactcttg
gacgagacgatctcggtatgcagtggtttcaaacaaagtgtttttaacgtgtctccttcg
tctttaactgactttcatcctctacatcagatcactttaatgtcgacatggaaagaaata
aagaagatcattaaagaagatccaagatgcattaagttttccagcagtgacaggaaaaga
cagagagagtttgatgactacattaaagacaaatacatcacagccaaagcagacttcaga
acactcctgaaagagaccaagttcatcacctacaaatctcgtaagttgatgcacgagtca
gagcagcacttgtcggaccttgagaaaatcttgcagaaagataaaagatatctggtcctg
gagtgcgtgccagacgaaagacacaaactcctcatgtcatatgtggaagagctggaccgc
aggggaccgcctccccctcccaccgcctttgaacctgctcgacgctccactaagtga
DBGET
integrated database retrieval system
