Paramisgurnus dabryanus (large-scale loach): 135719397
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Entry
135719397 CDS
T10799
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdab03009
]
135719397 (rrp9)
Ribosome biogenesis [BR:
pdab03009
]
Eukaryotic type
90S particles
Other 90S particles
135719397 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WDR54
WD40_like
VPS11_N
Beta-prop_RIG_1st
Ntox15
Motif
Other DBs
NCBI-GeneID:
135719397
NCBI-ProteinID:
XP_065098162
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All DBs
Position
14:complement(10104758..10111637)
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AA seq
475 aa
AA seq
DB search
MSSFFIKKKAVPNKGDKSSALKRKSNTDDGKGRSKKLNKRMNEEISSDSENESSAQNRQQ
AENEDDEIEETPQEKKLRLAKLYLEQLREEEEKKAEEETFETDLIAGRLQEDVLEQKGRL
QRLIAKELIAPDPAEIRLLRGHKLSVTCLVITPDEKYIFSASKDCSIIKWEVESGKKVHK
IARGHKGTDDQHVGHRSHVLCMAISSDGKYLATGDMNRFIMIWDAATCKHLYKLRGHRDA
VSGLAFRRGTHDLYSASHDRSVKVWNVAENAYVETLFGHQDKITALDCLSRERCVTAGGR
DRTVRVWKIAEESQLVFHGHESSIDCIQLINEEHMITGGDDGSLSVWTVNKKKPVSTVKQ
AHGSHGNTGLEQPYWVSSVAALHNSDTVASGASGSHNSSVKLWKCGQGFRGLEPLFSIPV
TGFINSLKFSNSGKFLVAGVGQEHRLGRWWRIKEAKNGLYIIPLKRQTKEPEVVQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctttctttataaagaaaaaagcggtgcctaataaaggagataaatcatctgct
ttaaaaagaaagagtaatacagacgatggcaaaggaagatcaaaaaagctcaataaacga
atgaacgaagaaatatcgagtgactcggaaaacgagagttcagcacaaaatagacaacag
gctgaaaatgaagatgatgagattgaggagacgccacaggagaagaaacttcgtctggca
aaactttacctggagcagctgagagaggaagaggagaagaaagcagaagaagaaactttt
gagaccgacctgatagctggaagactccaggaggatgtgctggaacaaaaaggccggcta
caaagactgatagccaaagaactcatagctcctgatccagcagagatccggctgttaaga
ggacacaaactgtcggtcacgtgtctcgtgatcaccccggatgaaaaatacatcttttct
gcaagcaaagactgctccatcatcaaatgggaggtggagagtggaaagaaggtgcacaag
atcgcacgtggacataaaggtacagacgatcaacacgtgggacacagatctcatgtgctg
tgtatggccatatcatctgatgggaaatacctggctactggagacatgaatcgattcatt
atgatctgggatgctgcaacatgtaaacacctgtacaagttaagaggccatagagatgct
gtatctggtttggcatttcgaagagggacccacgacctctacagcgcatcacatgaccgc
tcggtaaaagtgtggaacgttgcagagaacgcatatgtagaaaccttgtttggccatcag
gacaaaatcacagcgttggactgtttgagcagagagagatgtgtgaccgcaggaggaaga
gaccgaaccgtcagagtctggaagattgcagaagagtcacagcttgtgtttcacggacac
gagagctccattgattgtattcagcttataaatgaagagcacatgattacaggaggggat
gatggctccttgtctgtgtggaccgttaataaaaagaagccggtgagcacggtgaagcaa
gcccacggtagccatggcaacacaggtctggagcaaccttactgggtgtcgtccgtggcg
gcgttgcacaactcggacaccgttgcgtcaggtgcctcaggctcccataattcatcagtg
aagctttggaagtgtggacagggattcagaggcctggagcctctcttcagcatcccggtg
acgggattcataaacagcctgaagttctctaattctgggaagtttctcgtggcaggagtt
ggacaggagcacagattgggccgttggtggagaataaaggaggctaaaaacggactttat
atcattccccttaaaagacaaacaaaagagccagaagttgttcaatag
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