KEGG   Paramisgurnus dabryanus (large-scale loach): 135719804
Entry
135719804         CDS       T10799                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135719804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdab03041]
    135719804
Spliceosome [BR:pdab03041]
 Complex B
  Other components
   Prp19-related factors
    135719804
 Complex C
    135719804
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded zf-CCCH_2 Nup35_RRM_2 zf-CCCH RRM_YTH1 RRM_3 zf-CCCH_4 zf-CCCH_3 zf-CCCH_10 RRM_7 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 135719804
NCBI-ProteinID: XP_065098241
LinkDB
Position
16:complement(35199634..35209289)
AA seq 421 aa
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTSLSIKDEMPRSDVNKEYYTQN
MEREIQNSDDTRPVGMLGKAQKPSDMLLKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLNRASAMPHLDVPEDKSITTLYIGGLG
EDITDSELRSHFYQFGEIRTITLVQKQQCAFIQFATRQGAEHAAEKSFNKLIINGRRLAV
KWGRSQGAKGKDISEGFSEMGTRLDPVPGLPAPLPPPTALENEAPANYFNLDPSGPAVMN
LSLPPPPGLPNPPPPGFGHPMFHPMGLPPPPPMSLRPPGHIHYPSQDPHRMGAHSAIRHS
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgacgtccctgggatcaaatacatacaacagacagaactgggaagattcggacttc
cctattctctgtcaaacatgtttaggtgaaaatccatatattcgtatgaccaaggaaaaa
tatggcaaagaatgtaagatctgtgctcgtccattcactgttttccgctggtgtcctggt
gtgcgaatgcgctttaagaaaactgaagtctgtcagacctgcagtaagatgaaaaatgtc
tgtcagacctgtctgctggacctagagtacggtcttcctattcaggtcagagacacaagt
ctgtccattaaagacgagatgccaagatctgatgtgaacaaggagtattacacacagaat
atggagagagagatccaaaactctgatgacacgagacctgtggggatgctgggtaaagct
cagaaacctagcgacatgctgctcaaactggcccgaacatcaccgtactacaaacgcaac
agacctcacatctgctcattctgggtaaagggagaatgcaagagaggggaggagtgtcca
tacaggcacgagaagcccacagatcctgatgaccctctcgccgatcaaaacattaaagat
cgctattacggcatcaatgacccggtggcgaataaactcctgaatagagcgtcggccatg
ccacacctggatgtgcccgaggacaagtccatcactacattatacataggaggattggga
gaagacattactgattctgagctcaggagtcacttctatcagttcggggaaattcgtacg
atcacactggttcagaagcagcagtgtgcgttcattcagttcgccacgcgtcagggagcg
gagcacgccgccgagaaatccttcaacaagctcatcattaacggccgtagactggcggtg
aagtggggtcgttctcaaggcgctaaaggcaaagacatcagtgagggcttcagtgagatg
ggcaccagactggatccagtacctggtctgccagcacctctaccgccacctacagctctg
gagaatgaagccccagccaattactttaatctggaccctagtggtcctgcggtaatgaac
ctcagtcttccccctccacctggactcccaaacccaccaccaccaggttttggacatccc
atgttccaccccatgggtcttcctccacctccaccgatgagtttaagacctcctggccac
attcactacccctcccaggatcctcaccgcatgggtgcgcactctgccattcgccactct
gattga

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