Paramisgurnus dabryanus (large-scale loach): 135720244
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Entry
135720244 CDS
T10799
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135720244 (zeb1b)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
135720244 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
135720244
NCBI-ProteinID:
XP_065098274
LinkDB
All DBs
Position
1:52189515..52280780
Genome browser
AA seq
1078 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVPEGQSDSDDEDKLQIVEEEGSLLDAADCDSVAPD
DDHNGMADQDGRWDDVKEECMSDEDERSRDALVEEMLQQGDTAVIFPEAPDDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRA
QLDRHMTAHKSGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGVARTPQCSSPSLPTSSPTARAQ
IRDKLDNSKPLQEQLPLTQIKSEPIDFEYKPVVVTPSARGVNGIFQGGAAAPLQGAVQAV
VLPTVGLVSPISINLGDLQNMLKVAVDGNVIRQVLESTQAKGQQTGTGIQATQQVIQAIS
LPILDQDGNAKIIINYSLDPSQAQAVLQSPKKETLGTNSEVSKAQKLPEDLTVKTNRDKT
ITVDEKSMLHDDTTHKHCGKDGHRVNGKSLDGKMDLEDGLCPGKPPLKNLLSLLKAYFAL
NNEPTKDELAKISESVSLPAEVVKKWFEKMQLGQISVDPSSPLAEDEQTSPAELDGTNGV
SPRPEPDEQMNTEEPEERECCSPTQGKDAGMNGTESIPASPSPLNLSADGPVPARTNEEG
EGPLDLSLPKSAASPTVASGHANTVYSAQEEPLNLTCTKKELLNAAIYASQPSANPINIM
TTQLPTLVAITDQGQGQCLRAITTTKQTILIPQLAYSYTTTSSSPAGTDTPQKNILQVNG
IKEEKQEMGSEVTLEEQTDSDSGPTRKKMKRTESGLYACDLCDKIFQKSSSLLRHKYEHT
GKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCK
KEAQGQELSQGVEEEDNGGEEQPRTGSAATSPPSHLDSDERGSSTREDESEEEDEMGSGS
LVDEDEIQVVKIGDEGDEEDMGADEERMEETEQGEEEAQDEGDSEGDKDGQMLKVVVMQD
ECEEENGDEERTAEKEEAITDTHMKETSERVEELKENLADKKDSENEGNTPTINGDVK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacgaacgtg
agtaactacagtcatgtgccggagggccagtcggactcggacgatgaagataagcttcag
attgtggaggaggaaggaagtctgttggatgcggctgactgtgacagcgtggccccagac
gacgaccataacgggatggccgaccaggacggcagatgggacgatgtgaaagaagagtgc
atgtcagatgaagatgagaggagcagagatgctttagttgaggagatgctccagcaaggg
gacactgccgtcatcttcccagaggcaccagacgacgaaccacgacagggaacgccagag
acaagcggacatgatgaaaatggcacgccagactcgttctctcagctcctcacctgtccg
tattgctctcgtggttacaagcgttacacctcgctgaaggaacacattaaatacagacac
gagaaaagcgaggacaacttcagctgctctctgtgcagctacacctttgcctaccgcgca
cagctggacagacacatgaccgcacacaaaagtgggcgagaacagcgacatgttactcag
tcaggtggaggaggaaatcgaaagtttaaatgcactgaatgtggcaaagcctttaaatac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttatgaatgctcc
aactgcaagaaacgattctctcattctggatcctacagttctcacatcagcagtaagaag
tgcattggtctcatctcagtgaatgggcggccacggccctctcccgccactggggtggca
aggaccccacagtgctcttccccgtccctgccgacctcttcccctacagcacgtgcccaa
ataagagacaaactagacaacagcaaaccccttcaggagcagctccctttgacgcagatc
aagtctgagcctattgactttgagtacaagcctgtggtggtgactccatctgcaagaggg
gtaaatggcatattccagggtggggctgctgccccccttcagggtgccgtgcaggctgtt
gtgctcccaacagtaggcctggtttcccctatcagcatcaacctgggggacttgcagaac
atgctgaaggtggcggtggacgggaacgtcattagacaagtgcttgaaagcacccaggcc
aaggggcagcaaacagggacggggattcaggccacccagcaagttatccaagccattagt
cttcccatcctggatcaggatggcaatgccaagatcatcatcaactacagcctagaccct
tcacaggcccaagcagtgctgcagagtcccaagaaagaaactttgggaacaaactccgag
gtcagtaaggcacagaagctgccagaggacctgacagttaagacaaatagggacaaaacc
atcactgtggatgagaagagcatgttacatgatgacacgacacataaacactgtggtaaa
gatggacatagggttaatgggaaaagtcttgatggaaagatggacttagaagatggacta
tgtcctgggaagcctccattgaagaaccttctttctttgctcaaggcttactttgcctta
aataatgagcccacgaaggacgagctggcaaagatatccgaatcagtcagtcttccagca
gaggtggtgaagaagtggtttgagaagatgcagttgggacagatctctgtagacccctct
tcacccctggctgaagatgagcagaccagtcctgcagaactagatgggactaacggggta
tcacccagaccagagccggatgagcaaatgaatacagaggaaccagaggagagggaatgt
tgtagcccaacacaaggcaaagatgctgggatgaatggaactgagagcatccctgcatcc
ccttcaccactaaacctgtccgctgatggacctgtcccagccaggactaatgaggaaggc
gagggacccctcgatctgtcgctaccaaaatccgctgcttcgcctaccgtggctagcggg
cacgctaacactgtttactcggctcaagaggagccactgaatttgacttgcacaaagaag
gaactgctcaatgctgccatatatgccagccaaccaagtgccaatcccataaacatcatg
accactcaactgcccacactagtggctatcactgaccagggacaaggacaatgtctacgt
gcaattaccaccactaaacagaccatcctgatccctcagctagcctacagttacaccact
acatcctccagccctgcagggaccgatacgccgcagaagaatatactgcaagtcaatggc
atcaaggaggagaaacaggagatggggtcagaggtcactttggaagaacagacggactcg
gactcagggcctacgaggaagaagatgaaaaggacagagagtggcctgtacgcctgtgac
ctgtgtgataaaatcttccagaagagcagctcactgctccgccataaatacgaacataca
ggtaagaggcctcatgaatgtgggatctgcagtaaagccttcaaacacaagcaccacctg
atcgagcacctgcgcctgcactccggtgaaaaaccctaccagtgtgacaaatgcggcaaa
cgcttctctcactccggctcctactcgcaacacatgaatcaccgttactcctactgtaag
aaagaggctcagggtcaagagttgagccagggggtcgaggaagaggacaacggcggcgaa
gagcagcctcggacgggcagcgcggcaacctcgcccccctcccacctggactcggatgag
cgagggagtagcaccagagaagatgagagcgaggaagaggatgagatgggttcagggagt
ctagtggatgaagatgagattcaggtagtgaagattggagacgaaggagatgaggaggac
atgggagcagatgaagagaggatggaggaaacggaacaaggtgaggaggaggctcaagat
gaaggtgacagtgaaggagataaagacggacagatgctgaaagtggtggtgatgcaggac
gaatgtgaggaggaaaacggagatgaagaacgaactgcagagaaggaggaggcgataaca
gacacgcatatgaaggaaacgtcagaacgagtcgaagagttgaaggagaacctggctgat
aagaaagacagtgaaaatgaaggaaatacacccactataaacggagacgtaaaatga
DBGET
integrated database retrieval system
